Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 Y_RNA.105-201ENST00000363182 111 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.270-201ENST00000364693 104 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.462-201ENST00000384268 102 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.539-201ENST00000384635 107 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 MIR521-1-201ENST00000384902 87 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 RNU6-130P-201ENST00000411112 103 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 CKS1BP5-201ENST00000434172 273 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AL138752.1-201ENST00000452964 351 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 ISCUP1-201ENST00000454451 448 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AL136097.1-201ENST00000456945 913 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AC067942.3-201ENST00000512025 362 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 RNA5SP230-201ENST00000517039 122 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 MIR4672-201ENST00000583126 81 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 PRPF19P1-201ENST00000584766 898 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AC006077.1-201ENST00000604746 343 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 BX284668.6-201ENST00000606899 438 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 MIR8058-201ENST00000615737 89 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 MIR6891-201ENST00000618788 93 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AC091903.1-201ENST00000624322 454 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 DDX18P3-201ENST00000404856 2007 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 CPHL1P-201ENST00000461341 3407 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AC090971.4-201ENST00000560291 1800 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 AC009812.4-201ENST00000569134 1805 ntBASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL13A1Q5TAT6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AL136164.3-201ENST00000624429 3978 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 MIR412-201ENST00000362142 91 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 RNU6-356P-201ENST00000384140 107 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 U3.32-201ENST00000408116 212 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC079809.1-201ENST00000415468 276 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 RN7SL517P-201ENST00000462240 305 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 HSPE1P6-201ENST00000479457 291 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AL121603.1-201ENST00000553815 142 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC130289.1-201ENST00000577321 73 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC009314.1-201ENST00000603871 304 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC004792.1-201ENST00000614523 137 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AL353748.2-201ENST00000622148 471 ntBASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.87□□□□□ -1.63
COL13A1Q5TAT6 AC093535.2-201ENST00000624769 2326 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 UBBP2-201ENST00000376781 231 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 RNU6-746P-201ENST00000384112 109 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 RNU2-14P-201ENST00000411053 191 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 AP000275.1-201ENST00000411943 390 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 AL691449.1-201ENST00000426570 421 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 AL513124.1-201ENST00000450410 614 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 RN7SKP210-201ENST00000459176 261 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 RN7SL323P-201ENST00000494712 295 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 AL035425.3-201ENST00000564206 4996 ntBASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL13A1Q5TAT6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 AP001029.2-203ENST00000589795 4910 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 MIR449A-201ENST00000362113 91 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.237-201ENST00000364439 102 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.297-201ENST00000364950 91 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 Y_RNA.458-201ENST00000384240 102 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 MIR153-1-201ENST00000384914 90 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 SNORD56-201ENST00000413522 71 ntBASIC4.85□□□□□ -1.63
COL13A1Q5TAT6 COX5BP7-201ENST00000414780 274 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms