Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AC006026.2-201ENST00000457376 180 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AC243960.4-201ENST00000600532 288 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AC103810.9-201ENST00000606688 112 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 RNU6-10P-201ENST00000384036 107 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 RNU6-15P-201ENST00000384534 107 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
UBR4Q5T4S7 RNU6-1197P-201ENST00000391183 107 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 NDUFS5P6-201ENST00000529136 295 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 MIR6130-201ENST00000619419 109 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AP000943.4-201ENST00000622912 357 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 MIR1246-201ENST00000636535 73 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AC083865.1-201ENST00000636634 831 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 RPL21P111-201ENST00000418453 477 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 SDAD1P3-201ENST00000427380 333 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.27□□□□□ -2.37
UBR4Q5T4S7 KLRA1P-201ENST00000503499 986 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 CBX3P3-201ENST00000508108 532 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AL136313.1-201ENST00000624804 202 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
UBR4Q5T4S7 SNORA8-201ENST00000384574 139 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AC007751.1-201ENST00000529260 376 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 AC090666.1-201ENST00000578241 445 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 RPL30P11-203ENST00000598995 310 ntBASIC0.27□□□□□ -2.37
UBR4Q5T4S7 Y_RNA.437-201ENST00000384113 113 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 XKRYP6-201ENST00000440468 1116 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 XKRYP3-201ENST00000442113 1116 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC023424.2-201ENST00000493479 777 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC245128.3-201ENST00000594721 748 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC113368.1-201ENST00000603736 382 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC011155.1-201ENST00000316512 456 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 Y_RNA.562-201ENST00000384695 113 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AP001328.1-201ENST00000528550 176 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 PRR13P7-201ENST00000605538 430 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 SNORA22-201ENST00000383907 134 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 SNORA22C-201ENST00000384614 134 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 MIR32-201ENST00000384965 70 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 RPL31P52-201ENST00000407532 367 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.26□□□□□ -2.37
UBR4Q5T4S7 RPL21P93-201ENST00000480465 489 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC093591.1-201ENST00000491435 481 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 RPL30P5-201ENST00000494923 336 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.26□□□□□ -2.37
UBR4Q5T4S7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
UBR4Q5T4S7 RNU6-799P-201ENST00000363567 107 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 RPL39P28-201ENST00000465655 155 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.26□□□□□ -2.37
UBR4Q5T4S7 AC012507.3-201ENST00000603556 477 ntBASIC0.26□□□□□ -2.37
UBR4Q5T4S7 MIR515-2-201ENST00000384883 83 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 MIR515-1-201ENST00000384884 83 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 MTCO3P46-201ENST00000425787 232 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 RNU6-953P-201ENST00000459154 107 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC109809.1-201ENST00000619665 545 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC091812.1-201ENST00000432235 1948 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 SNORA32.3-201ENST00000384772 121 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AL031577.2-201ENST00000404133 280 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC244453.4-201ENST00000419150 388 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 HSPE1P1-201ENST00000421494 318 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC246680.2-201ENST00000422106 389 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC020699.1-201ENST00000505161 445 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC096745.1-201ENST00000509945 370 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 NOP56P3-201ENST00000549457 385 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 NBEAP1-201ENST00000554452 979 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 MIR4278-201ENST00000636094 69 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AL356379.1-201ENST00000414105 126 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 MTCO3P45-201ENST00000443036 613 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 NDUFB4P10-201ENST00000452541 359 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 RNU6-970P-201ENST00000516312 107 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 SNORD59.2-201ENST00000516873 68 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
UBR4Q5T4S7 SNORA32.1-201ENST00000364514 115 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 RPL23AP47-201ENST00000408017 460 ntBASIC0.25□□□□□ -2.37
UBR4Q5T4S7 RNU2-64P-201ENST00000411315 191 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms