Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.92□□□□□ -2.26
NUP188Q5SRE5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.92□□□□□ -2.26
NUP188Q5SRE5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.92□□□□□ -2.26
NUP188Q5SRE5 AC079448.1-201ENST00000449377 373 ntBASIC0.92□□□□□ -2.26
NUP188Q5SRE5 SUMO2P2-201ENST00000456482 255 ntBASIC0.92□□□□□ -2.26
NUP188Q5SRE5 RNU7-23P-201ENST00000459465 62 ntBASIC0.92□□□□□ -2.26
NUP188Q5SRE5 KLF3P2-201ENST00000465138 268 ntBASIC0.92□□□□□ -2.26
NUP188Q5SRE5 AC104629.2-201ENST00000468627 598 ntBASIC0.92□□□□□ -2.26
NUP188Q5SRE5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.92□□□□□ -2.26
NUP188Q5SRE5 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.92□□□□□ -2.26
NUP188Q5SRE5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
NUP188Q5SRE5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.92□□□□□ -2.26
NUP188Q5SRE5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.92□□□□□ -2.26
NUP188Q5SRE5 RNU4-23P-201ENST00000362839 140 ntBASIC0.91□□□□□ -2.26
NUP188Q5SRE5 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.91□□□□□ -2.26
NUP188Q5SRE5 AL589880.1-201ENST00000448271 287 ntBASIC0.91□□□□□ -2.26
NUP188Q5SRE5 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.91□□□□□ -2.26
NUP188Q5SRE5 SCARNA11.3-201ENST00000517276 130 ntBASIC0.91□□□□□ -2.26
NUP188Q5SRE5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.91□□□□□ -2.26
NUP188Q5SRE5 AC090888.1-201ENST00000561335 1141 ntBASIC0.91□□□□□ -2.26
NUP188Q5SRE5 AP001485.1-201ENST00000604799 199 ntBASIC0.91□□□□□ -2.26
NUP188Q5SRE5 AC090132.2-201ENST00000615881 347 ntBASIC0.91□□□□□ -2.26
NUP188Q5SRE5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
NUP188Q5SRE5 AL356473.1-201ENST00000406203 1408 ntBASIC0.91□□□□□ -2.26
NUP188Q5SRE5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.91□□□□□ -2.26
NUP188Q5SRE5 RPL23AP32-201ENST00000395315 459 ntBASIC0.9□□□□□ -2.27
NUP188Q5SRE5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.9□□□□□ -2.27
NUP188Q5SRE5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.9□□□□□ -2.27
NUP188Q5SRE5 RPL39P29-201ENST00000447779 157 ntBASIC0.9□□□□□ -2.27
NUP188Q5SRE5 AC104164.3-201ENST00000467363 1258 ntBASIC0.9□□□□□ -2.27
NUP188Q5SRE5 SNORA48.10-201ENST00000516965 160 ntBASIC0.9□□□□□ -2.27
NUP188Q5SRE5 SNORA48.11-201ENST00000517015 89 ntBASIC0.9□□□□□ -2.27
NUP188Q5SRE5 AC104997.1-201ENST00000519761 717 ntBASIC0.9□□□□□ -2.27
NUP188Q5SRE5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.9□□□□□ -2.27
NUP188Q5SRE5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.9□□□□□ -2.27
NUP188Q5SRE5 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.9□□□□□ -2.27
NUP188Q5SRE5 MIR3126-201ENST00000577443 74 ntBASIC0.9□□□□□ -2.27
NUP188Q5SRE5 AC011260.1-201ENST00000578420 472 ntBASIC0.9□□□□□ -2.27
NUP188Q5SRE5 AP003476.1-201ENST00000623984 516 ntBASIC0.9□□□□□ -2.27
NUP188Q5SRE5 RNU6-1226P-201ENST00000384317 107 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 AL158823.1-201ENST00000418441 478 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 HMGB1P9-201ENST00000429856 646 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 HMGB1P14-201ENST00000557424 591 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 AC100821.1-201ENST00000523153 2479 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 ELL2P3-201ENST00000457883 1602 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 Y_RNA.280-201ENST00000364765 112 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 U3.13-201ENST00000364804 214 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 RNA5SP125-201ENST00000364843 120 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 Y_RNA.412-201ENST00000384001 104 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 AC092628.1-201ENST00000436250 252 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 snoU109.1-201ENST00000459339 135 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 AC117454.1-201ENST00000491120 168 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
NUP188Q5SRE5 RNU6-229P-201ENST00000516614 102 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 MIR4713-201ENST00000582691 75 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 AC068276.1-201ENST00000605793 379 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 AL627230.5-201ENST00000619807 58 ntBASIC0.89□□□□□ -2.27
NUP188Q5SRE5 BTF3L4P2-201ENST00000392798 346 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.88□□□□□ -2.27
NUP188Q5SRE5 AC092047.1-201ENST00000424997 240 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 MTND4LP10-201ENST00000435146 291 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 RPS20P24-201ENST00000457473 361 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.88□□□□□ -2.27
NUP188Q5SRE5 AC114786.4-201ENST00000508771 728 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 AF213884.2-201ENST00000510417 903 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 AC114797.1-201ENST00000514003 728 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 AP003355.1-201ENST00000518956 587 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 MIR3198-2-201ENST00000577868 80 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 AC010615.3-201ENST00000597319 394 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 DUSP12P1-201ENST00000612874 516 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 AP003485.1-201ENST00000625093 753 ntBASIC0.88□□□□□ -2.27
NUP188Q5SRE5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.88□□□□□ -2.27
NUP188Q5SRE5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
NUP188Q5SRE5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
NUP188Q5SRE5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
NUP188Q5SRE5 OR9R1P-201ENST00000412200 877 ntBASIC0.87□□□□□ -2.27
NUP188Q5SRE5 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.87□□□□□ -2.27
NUP188Q5SRE5 AC021146.2-201ENST00000504736 556 ntBASIC0.87□□□□□ -2.27
NUP188Q5SRE5 FAM206BP-201ENST00000510179 541 ntBASIC0.87□□□□□ -2.27
NUP188Q5SRE5 AC008834.1-201ENST00000511612 175 ntBASIC0.87□□□□□ -2.27
NUP188Q5SRE5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.87□□□□□ -2.27
NUP188Q5SRE5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.87□□□□□ -2.27
NUP188Q5SRE5 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.87□□□□□ -2.27
NUP188Q5SRE5 AC068057.2-201ENST00000624047 895 ntBASIC0.87□□□□□ -2.27
NUP188Q5SRE5 RN7SKP61-201ENST00000410642 295 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC092393.1-201ENST00000439625 742 ntBASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.86□□□□□ -2.27
NUP188Q5SRE5 AC103851.1-201ENST00000506833 274 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms