Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPL21P3-201ENST00000395517 478 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AL031121.1-201ENST00000406553 254 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC007560.1-201ENST00000426912 237 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC005300.1-201ENST00000428401 373 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 ATP5C1P1-201ENST00000441945 895 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AL078601.1-201ENST00000444542 271 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC146507.2-201ENST00000460608 476 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC008716.1-201ENST00000511084 513 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC112206.3-201ENST00000514578 389 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 RNU1-143P-201ENST00000516296 146 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 HIF1AP1-201ENST00000553642 175 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 AL157687.1-201ENST00000554853 619 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 BNIP3P30-201ENST00000601184 574 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC025165.5-201ENST00000602802 578 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 U1.23-201ENST00000610293 146 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 MIR7851-201ENST00000610611 160 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 RNU1-68P-201ENST00000615382 146 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 U1.39-201ENST00000621562 146 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC068137.3-201ENST00000639191 341 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 AC073869.6-201ENST00000640656 341 ntBASIC3.44□□□□□ -1.86
CCDC38Q502W7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC38Q502W7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC38Q502W7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC38Q502W7 RNU6-166P-201ENST00000384371 107 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 RPL5P18-201ENST00000406671 891 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 RN7SKP111-201ENST00000410349 271 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 RPL21P90-201ENST00000415692 466 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 AC000111.3-201ENST00000433478 193 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 RPS15AP5-201ENST00000436276 388 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 AL360271.2-201ENST00000447710 161 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 RPL7P49-201ENST00000471402 708 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 LRRC34P2-201ENST00000514850 553 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 OR5AQ1P-201ENST00000527596 927 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 AK6P1-201ENST00000540219 478 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 MIR4444-1-201ENST00000581696 74 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 MIR4444-2-201ENST00000584390 74 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 AC004492.1-201ENST00000607036 742 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 AC012314.7-201ENST00000619693 93 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.43□□□□□ -1.86
CCDC38Q502W7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC38Q502W7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC027514.1-201ENST00000588561 1603 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CCDC38Q502W7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 Y_RNA.9-201ENST00000362354 101 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 SNORA71.3-201ENST00000362582 128 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 SNORD46.1-201ENST00000364139 104 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 Y_RNA.554-201ENST00000384672 102 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 RNA5SP354-201ENST00000391247 136 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AL356057.2-201ENST00000403318 432 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC023141.4-201ENST00000412031 328 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC091286.1-201ENST00000431233 461 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC38Q502W7 HMGN2P10-201ENST00000448085 265 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 Z99127.3-201ENST00000448158 395 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC38Q502W7 NDUFB1P2-201ENST00000449477 176 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 RPS26P21-201ENST00000475397 348 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC38Q502W7 RNU6-835P-201ENST00000516974 104 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AP003033.1-201ENST00000527244 415 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AL137161.1-201ENST00000532231 390 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC136619.2-201ENST00000563361 631 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 CYCSP39-201ENST00000565821 309 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC025281.1-201ENST00000567026 265 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC010653.1-201ENST00000571108 881 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC084757.4-201ENST00000616350 526 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC38Q502W7 AC110079.1-202ENST00000635213 138 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 MTND5P19-201ENST00000424872 1794 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.42□□□□□ -1.86
CCDC38Q502W7 AL354685.2-201ENST00000448218 1447 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms