Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.34□□□□□ -1.87
UBE3AQ05086 NDUFS5P4-201ENST00000412983 318 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBE3AQ05086 AL353193.1-201ENST00000421444 268 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.34□□□□□ -1.87
UBE3AQ05086 SKA2P1-201ENST00000425592 390 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.34□□□□□ -1.87
UBE3AQ05086 MTND1P34-201ENST00000438556 671 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 FTH1P25-201ENST00000447665 469 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 RPL23AP20-201ENST00000447965 421 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 MTND1P18-201ENST00000448191 573 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 MRPS31P2-201ENST00000451581 518 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 AC027673.1-201ENST00000456245 405 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 AL356010.1-201ENST00000456364 102 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 RNU7-63P-201ENST00000459054 62 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 RPS29P20-201ENST00000489592 171 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 EIF4EP3-201ENST00000498782 656 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 MTND4LP22-201ENST00000508209 276 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 AP001893.2-201ENST00000526949 202 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.34□□□□□ -1.87
UBE3AQ05086 ELOCP29-201ENST00000588193 334 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.34□□□□□ -1.87
UBE3AQ05086 AC017083.3-201ENST00000609955 700 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 uc_338.11-201ENST00000619132 160 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 AC098679.4-201ENST00000624241 654 ntBASIC3.34□□□□□ -1.87
UBE3AQ05086 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBE3AQ05086 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
UBE3AQ05086 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
UBE3AQ05086 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.33□□□□□ -1.88
UBE3AQ05086 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE3AQ05086 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3AQ05086 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
UBE3AQ05086 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE3AQ05086 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE3AQ05086 CKAP2P1-201ENST00000555477 2049 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 AC110774.1-201ENST00000623567 2018 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE3AQ05086 OR4G2P-201ENST00000328113 903 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE3AQ05086 Y_RNA.33-201ENST00000362591 102 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 RNU6-395P-201ENST00000365662 106 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
UBE3AQ05086 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE3AQ05086 RNU6-116P-201ENST00000384042 109 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
UBE3AQ05086 RNU6-1025P-201ENST00000410629 104 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 MTCYBP5-201ENST00000423752 1135 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 AL353729.1-201ENST00000425044 720 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 CST9LP2-201ENST00000437612 320 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3AQ05086 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.33□□□□□ -1.88
UBE3AQ05086 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE3AQ05086 AC104058.1-201ENST00000448028 297 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 Z99127.3-201ENST00000448158 395 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3AQ05086 SRRM1P2-201ENST00000464531 1192 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 RPL36AP51-201ENST00000487216 318 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 AC092185.1-201ENST00000491371 97 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE3AQ05086 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.33□□□□□ -1.88
UBE3AQ05086 AC117522.3-201ENST00000507974 584 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 AC105417.1-201ENST00000514691 285 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 RNA5SP356-201ENST00000515972 94 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 RNU6-506P-201ENST00000516553 94 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE3AQ05086 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.33□□□□□ -1.88
UBE3AQ05086 AL138889.2-201ENST00000603883 242 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 AC008945.2-201ENST00000606056 604 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE3AQ05086 AL359880.1-201ENST00000621879 266 ntBASIC3.33□□□□□ -1.88
UBE3AQ05086 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
UBE3AQ05086 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3AQ05086 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3AQ05086 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3AQ05086 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3AQ05086 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3AQ05086 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UBE3AQ05086 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE3AQ05086 AC103988.1-201ENST00000566382 2177 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE3AQ05086 Y_RNA.409-201ENST00000383990 98 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 RNU6-301P-201ENST00000384277 107 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 RNU6-658P-201ENST00000384606 106 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 AL139039.1-201ENST00000401900 692 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 AL591416.1-201ENST00000404015 867 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 EEF1A1P41-201ENST00000414667 207 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 OR6C66P-201ENST00000414917 930 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 MTCO3P30-201ENST00000426425 670 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE3AQ05086 HMGB1P9-201ENST00000429856 646 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 AL596276.1-201ENST00000434465 418 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 RPS27AP10-201ENST00000496103 208 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 FCF1P3-201ENST00000496394 590 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE3AQ05086 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.32□□□□□ -1.88
UBE3AQ05086 RN7SKP272-201ENST00000516988 232 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 AC009902.1-201ENST00000519351 183 ntBASIC3.32□□□□□ -1.88
UBE3AQ05086 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE3AQ05086 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.32□□□□□ -1.88
UBE3AQ05086 MIR4703-201ENST00000577728 79 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms