Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.96□□□□□ -2.26
HIST1H1AQ02539 AC132942.1-201ENST00000486753 483 ntBASIC0.96□□□□□ -2.26
HIST1H1AQ02539 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.96□□□□□ -2.26
HIST1H1AQ02539 RNA5SP445-201ENST00000515889 115 ntBASIC0.96□□□□□ -2.26
HIST1H1AQ02539 RNU6-902P-201ENST00000517212 91 ntBASIC0.96□□□□□ -2.26
HIST1H1AQ02539 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.96□□□□□ -2.26
HIST1H1AQ02539 AC009977.1-201ENST00000586015 570 ntBASIC0.96□□□□□ -2.26
HIST1H1AQ02539 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.96□□□□□ -2.26
HIST1H1AQ02539 AC021646.1-201ENST00000605469 484 ntBASIC0.96□□□□□ -2.26
HIST1H1AQ02539 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.96□□□□□ -2.26
HIST1H1AQ02539 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
HIST1H1AQ02539 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HIST1H1AQ02539 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
HIST1H1AQ02539 MTND5P11-201ENST00000511037 1812 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 RNU6-40P-201ENST00000384254 107 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 RNU1-57P-201ENST00000384491 166 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.95□□□□□ -2.26
HIST1H1AQ02539 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AL353621.1-201ENST00000418219 243 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 NANOGP2-201ENST00000435391 727 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 USP9YP35-201ENST00000435696 412 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AC017099.1-201ENST00000448261 1028 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AC245102.2-201ENST00000448956 180 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 RPL36AP48-201ENST00000485521 314 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AL160314.1-201ENST00000490836 438 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AC048346.1-201ENST00000510247 144 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AP003033.1-201ENST00000527244 415 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AC002545.1-201ENST00000592511 181 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AC004853.1-201ENST00000604902 698 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AL512598.1-201ENST00000610158 273 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 MIR8074-201ENST00000615081 81 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AL603758.1-201ENST00000618654 241 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.95□□□□□ -2.26
HIST1H1AQ02539 AL512506.2-201ENST00000624472 458 ntBASIC0.95□□□□□ -2.26
HIST1H1AQ02539 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
HIST1H1AQ02539 SNORD116-23-201ENST00000384645 92 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AC127391.1-201ENST00000411737 98 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 RPL37P10-201ENST00000412884 288 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AL592310.1-201ENST00000414330 671 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.94□□□□□ -2.26
HIST1H1AQ02539 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AL353706.1-201ENST00000436728 494 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 FDX1P2-201ENST00000450769 375 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AC009474.2-201ENST00000451383 136 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.94□□□□□ -2.26
HIST1H1AQ02539 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AL441985.1-201ENST00000457727 251 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 RN7SKP210-201ENST00000459176 261 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 RPS15AP17-201ENST00000470598 390 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AC004223.1-201ENST00000479840 271 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AC139453.3-201ENST00000493276 369 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AC108210.2-201ENST00000503681 201 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AP003034.1-201ENST00000534621 422 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 RPL21P5-201ENST00000554662 472 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AC005668.1-201ENST00000571142 476 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AL713866.2-201ENST00000603579 219 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 ELOCP5-201ENST00000604924 333 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AL391813.2-201ENST00000609113 322 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 AL109620.1-201ENST00000618738 1197 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 MTCO1P9-201ENST00000505577 1534 ntBASIC0.94□□□□□ -2.26
HIST1H1AQ02539 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 SNORA25.8-201ENST00000364831 128 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 SNORA70.7-201ENST00000384159 133 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 U8.10-201ENST00000384260 133 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 MIR764-201ENST00000390811 85 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 RNA5SP213-201ENST00000391031 106 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AL591034.2-201ENST00000402839 359 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 RNA5SP501-201ENST00000410990 112 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 HMGB1P31-201ENST00000437242 427 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC005908.1-201ENST00000468701 347 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 RNU6-840P-201ENST00000517275 65 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC090821.2-201ENST00000523552 176 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC079598.5-201ENST00000547460 117 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC019288.1-201ENST00000557918 224 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC005951.2-201ENST00000576282 495 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 MIR4421-201ENST00000578133 69 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 BNIP3P24-201ENST00000593398 557 ntBASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms