Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AP006587.4-201ENST00000526053 529 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 ARL2BPP2-201ENST00000550907 489 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 MIR5697-201ENST00000578045 78 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC090616.2-202ENST00000584248 222 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 WISP1-OT1-201ENST00000602893 642 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AL161798.1-201ENST00000604630 131 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC239868.4-201ENST00000608318 671 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AL360219.1-201ENST00000610230 366 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC091953.2-201ENST00000623979 160 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
HMGCS1Q01581 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGCS1Q01581 MTND5P6-201ENST00000422338 1798 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGCS1Q01581 ELF2P3-201ENST00000445099 1506 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGCS1Q01581 UBE2L2-201ENST00000254302 429 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 AP000568.1-201ENST00000282964 442 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 SNORA38-201ENST00000363946 132 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 RNU6-920P-201ENST00000410926 92 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGCS1Q01581 AC023141.4-201ENST00000412031 328 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 ELOCP17-201ENST00000414751 326 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 SEPT2P1-201ENST00000419651 180 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HMGCS1Q01581 WARS2P1-201ENST00000429678 537 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 MTND5P25-201ENST00000430499 799 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 IFNA11P-201ENST00000446352 526 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 AL590365.1-201ENST00000450788 243 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGCS1Q01581 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGCS1Q01581 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGCS1Q01581 RPS3AP22-201ENST00000488297 769 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 AC005178.1-201ENST00000508392 440 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 MRPS33P3-201ENST00000513456 322 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGCS1Q01581 SNORA31.3-201ENST00000516029 96 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 RNU6-232P-201ENST00000517144 64 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGCS1Q01581 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGCS1Q01581 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGCS1Q01581 AC009063.1-201ENST00000563342 702 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 ROCK1P1-201ENST00000573767 549 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 AC008498.1-201ENST00000613012 531 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 MIR7844-201ENST00000616161 122 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 AC006338.1-201ENST00000618453 749 ntBASIC2.08□□□□□ -2.08
HMGCS1Q01581 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGCS1Q01581 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HMGCS1Q01581 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGCS1Q01581 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGCS1Q01581 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGCS1Q01581 BTF3P7-201ENST00000407097 488 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 RNU2-36P-201ENST00000410361 191 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 RNU4-72P-201ENST00000410754 173 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 SKA2P1-201ENST00000425592 390 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 AL133217.1-201ENST00000450980 425 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 KATNBL1P6-201ENST00000453433 915 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 ART2BP-201ENST00000453501 499 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 AL139109.1-201ENST00000455491 297 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 RPL26P9-201ENST00000457466 433 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 BZW1P2-201ENST00000473537 826 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC105252.1-201ENST00000503089 286 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 RNA5SP165-201ENST00000517142 115 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 AP003181.2-201ENST00000528941 181 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC103710.2-201ENST00000609912 942 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 uc_338.12-201ENST00000616344 181 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC079248.2-201ENST00000623779 326 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 AC064859.1-201ENST00000624741 174 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.07□□□□□ -2.08
HMGCS1Q01581 MIR203B-201ENST00000636080 86 ntBASIC2.07□□□□□ -2.08
HMGCS1Q01581 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGCS1Q01581 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HMGCS1Q01581 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
HMGCS1Q01581 MTND5P29-201ENST00000458676 1807 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 AC004944.1-201ENST00000517807 3059 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 RNU6-553P-201ENST00000364047 96 ntBASIC2.06□□□□□ -2.08
HMGCS1Q01581 RNU1-91P-201ENST00000364746 163 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms