Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.65□□□□□ -2.15
TPM4P67936 AL033519.2-201ENST00000403958 392 ntBASIC1.65□□□□□ -2.15
TPM4P67936 AC127391.1-201ENST00000411737 98 ntBASIC1.65□□□□□ -2.15
TPM4P67936 EIF4EP2-201ENST00000422816 654 ntBASIC1.65□□□□□ -2.15
TPM4P67936 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.65□□□□□ -2.15
TPM4P67936 MTND4P6-201ENST00000438297 472 ntBASIC1.65□□□□□ -2.15
TPM4P67936 MTCO3P45-201ENST00000443036 613 ntBASIC1.65□□□□□ -2.15
TPM4P67936 AC092001.1-201ENST00000453012 261 ntBASIC1.65□□□□□ -2.15
TPM4P67936 KATNBL1P6-201ENST00000453433 915 ntBASIC1.65□□□□□ -2.15
TPM4P67936 FABP5P15-201ENST00000453566 214 ntBASIC1.65□□□□□ -2.15
TPM4P67936 AC093752.1-206ENST00000511823 336 ntBASIC1.65□□□□□ -2.15
TPM4P67936 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.65□□□□□ -2.15
TPM4P67936 RNU6-581P-201ENST00000516214 105 ntBASIC1.65□□□□□ -2.15
TPM4P67936 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
TPM4P67936 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
TPM4P67936 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
TPM4P67936 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.65□□□□□ -2.15
TPM4P67936 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.65□□□□□ -2.15
TPM4P67936 SNRPGP17-201ENST00000603780 214 ntBASIC1.65□□□□□ -2.15
TPM4P67936 AC009318.2-201ENST00000610917 651 ntBASIC1.65□□□□□ -2.15
TPM4P67936 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.65□□□□□ -2.15
TPM4P67936 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.65□□□□□ -2.15
TPM4P67936 AL356292.1-201ENST00000283110 373 ntBASIC1.64□□□□□ -2.15
TPM4P67936 NACAP2-201ENST00000318548 624 ntBASIC1.64□□□□□ -2.15
TPM4P67936 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TPM4P67936 RNU6-952P-201ENST00000391164 108 ntBASIC1.64□□□□□ -2.15
TPM4P67936 AL627390.1-201ENST00000396055 340 ntBASIC1.64□□□□□ -2.15
TPM4P67936 RNU4-26P-201ENST00000410270 107 ntBASIC1.64□□□□□ -2.15
TPM4P67936 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.64□□□□□ -2.15
TPM4P67936 UBE2FP1-201ENST00000416536 447 ntBASIC1.64□□□□□ -2.15
TPM4P67936 AL513185.2-201ENST00000425543 193 ntBASIC1.64□□□□□ -2.15
TPM4P67936 VN1R108P-201ENST00000431580 830 ntBASIC1.64□□□□□ -2.15
TPM4P67936 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.64□□□□□ -2.15
TPM4P67936 AL357134.1-201ENST00000445848 426 ntBASIC1.64□□□□□ -2.15
TPM4P67936 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.64□□□□□ -2.15
TPM4P67936 RNU7-136P-201ENST00000458819 69 ntBASIC1.64□□□□□ -2.15
TPM4P67936 AC112771.1-201ENST00000463581 102 ntBASIC1.64□□□□□ -2.15
TPM4P67936 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TPM4P67936 AC011005.2-201ENST00000487324 359 ntBASIC1.64□□□□□ -2.15
TPM4P67936 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.64□□□□□ -2.15
TPM4P67936 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TPM4P67936 SLC2A13P1-201ENST00000531560 322 ntBASIC1.64□□□□□ -2.15
TPM4P67936 AK6P1-201ENST00000540219 478 ntBASIC1.64□□□□□ -2.15
TPM4P67936 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.64□□□□□ -2.15
TPM4P67936 YWHAZP1-201ENST00000556286 722 ntBASIC1.64□□□□□ -2.15
TPM4P67936 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.64□□□□□ -2.15
TPM4P67936 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
TPM4P67936 AP001542.1-201ENST00000591314 200 ntBASIC1.64□□□□□ -2.15
TPM4P67936 AC098826.3-201ENST00000603823 466 ntBASIC1.64□□□□□ -2.15
TPM4P67936 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.64□□□□□ -2.15
TPM4P67936 AC008121.3-201ENST00000618726 433 ntBASIC1.64□□□□□ -2.15
TPM4P67936 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.64□□□□□ -2.15
TPM4P67936 AC138627.2-201ENST00000624202 601 ntBASIC1.64□□□□□ -2.15
TPM4P67936 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
TPM4P67936 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TPM4P67936 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TPM4P67936 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TPM4P67936 AL161781.1-201ENST00000354277 403 ntBASIC1.63□□□□□ -2.15
TPM4P67936 SNORD114-1-201ENST00000362705 72 ntBASIC1.63□□□□□ -2.15
TPM4P67936 RNU1-23P-201ENST00000363361 144 ntBASIC1.63□□□□□ -2.15
TPM4P67936 RNU6-432P-201ENST00000384196 109 ntBASIC1.63□□□□□ -2.15
TPM4P67936 AL139397.2-201ENST00000404529 772 ntBASIC1.63□□□□□ -2.15
TPM4P67936 MIR1283-2-201ENST00000408621 87 ntBASIC1.63□□□□□ -2.15
TPM4P67936 USP9YP26-201ENST00000421008 661 ntBASIC1.63□□□□□ -2.15
TPM4P67936 MTCO3P46-201ENST00000425787 232 ntBASIC1.63□□□□□ -2.15
TPM4P67936 MTCO1P3-201ENST00000429327 192 ntBASIC1.63□□□□□ -2.15
TPM4P67936 GPM6BP2-201ENST00000432046 144 ntBASIC1.63□□□□□ -2.15
TPM4P67936 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM4P67936 RPL36AP53-201ENST00000432891 316 ntBASIC1.63□□□□□ -2.15
TPM4P67936 GPM6BP1-201ENST00000446387 144 ntBASIC1.63□□□□□ -2.15
TPM4P67936 AC026414.1-201ENST00000504046 698 ntBASIC1.63□□□□□ -2.15
TPM4P67936 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.63□□□□□ -2.15
TPM4P67936 HMGB1P28-201ENST00000507778 552 ntBASIC1.63□□□□□ -2.15
TPM4P67936 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.63□□□□□ -2.15
TPM4P67936 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM4P67936 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM4P67936 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.63□□□□□ -2.15
TPM4P67936 SNORD53B-201ENST00000577887 78 ntBASIC1.63□□□□□ -2.15
TPM4P67936 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.63□□□□□ -2.15
TPM4P67936 AC091057.3-201ENST00000602684 733 ntBASIC1.63□□□□□ -2.15
TPM4P67936 AL583856.2-201ENST00000606298 543 ntBASIC1.63□□□□□ -2.15
TPM4P67936 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TPM4P67936 AC091834.1-201ENST00000614543 472 ntBASIC1.63□□□□□ -2.15
TPM4P67936 AC108479.2-201ENST00000617314 601 ntBASIC1.63□□□□□ -2.15
TPM4P67936 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
TPM4P67936 RNU5B-1-201ENST00000363286 116 ntBASIC1.62□□□□□ -2.15
TPM4P67936 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.62□□□□□ -2.15
TPM4P67936 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.62□□□□□ -2.15
TPM4P67936 ISCA1P1-201ENST00000426679 387 ntBASIC1.62□□□□□ -2.15
TPM4P67936 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.62□□□□□ -2.15
TPM4P67936 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.62□□□□□ -2.15
TPM4P67936 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.62□□□□□ -2.15
TPM4P67936 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.62□□□□□ -2.15
TPM4P67936 RPS15AP36-201ENST00000492022 382 ntBASIC1.62□□□□□ -2.15
TPM4P67936 RPS29P21-201ENST00000496272 170 ntBASIC1.62□□□□□ -2.15
TPM4P67936 PSMA3P-201ENST00000555485 635 ntBASIC1.62□□□□□ -2.15
TPM4P67936 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.62□□□□□ -2.15
TPM4P67936 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.62□□□□□ -2.15
TPM4P67936 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.62□□□□□ -2.15
TPM4P67936 BBIP1P1-201ENST00000602999 279 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms