Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC084851.1-201ENST00000529105 249 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AC022080.3-201ENST00000544433 482 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 EIF4BP1-201ENST00000554881 351 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN2P57739 MIR1273C-201ENST00000578669 77 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN2P57739 AP000907.4-201ENST00000604143 237 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 FTX_3.1-201ENST00000610451 147 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 uc_338.25-201ENST00000613756 156 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AC010338.1-201ENST00000621823 717 ntBASIC3.15□□□□□ -1.91
CLDN2P57739 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN2P57739 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN2P57739 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN2P57739 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CLDN2P57739 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CLDN2P57739 RIOK3P1-201ENST00000418778 1528 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN2P57739 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN2P57739 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN2P57739 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN2P57739 Y_RNA.111-201ENST00000363248 100 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 SNORA4.3-201ENST00000365564 137 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 RNU6-395P-201ENST00000365662 106 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CLDN2P57739 UBE2V1P2-201ENST00000397758 440 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 RPL5P18-201ENST00000406671 891 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 RNA5SP118-201ENST00000410385 109 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 RNU6-1068P-201ENST00000410958 103 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN2P57739 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN2P57739 SETP5-201ENST00000437270 562 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN2P57739 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 RPL31P58-201ENST00000469001 379 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN2P57739 SUMO2P6-201ENST00000505273 288 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 AC091885.1-201ENST00000506658 268 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN2P57739 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN2P57739 RNA5SP165-201ENST00000517142 115 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 AL138976.2-201ENST00000563989 694 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 MIR4474-201ENST00000579189 78 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 HSPE1P7-201ENST00000604681 321 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 AC004805.2-201ENST00000605382 482 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 AC103710.3-201ENST00000608157 948 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 RMST_8.1-201ENST00000610287 165 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 DUSP12P1-201ENST00000612874 516 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 AC099506.2-201ENST00000623074 221 ntBASIC3.14□□□□□ -1.91
CLDN2P57739 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN2P57739 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN2P57739 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN2P57739 AC005183.1-201ENST00000603687 1979 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 NACAP2-201ENST00000318548 624 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 FTLP6-201ENST00000355274 422 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 SNORA7.4-201ENST00000384249 137 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLDN2P57739 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN2P57739 RNU6-55P-201ENST00000411092 107 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 RNU6-954P-201ENST00000411355 107 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 MTND1P23-201ENST00000416931 372 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN2P57739 BX679664.1-201ENST00000434429 253 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 HMGN2P20-201ENST00000437531 273 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 RBMX2P4-201ENST00000441256 376 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN2P57739 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN2P57739 SNORA59A-201ENST00000459326 152 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 RPL23AP62-201ENST00000463396 453 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 RPS29P25-201ENST00000481709 171 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN2P57739 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN2P57739 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN2P57739 AC009812.2-201ENST00000517657 457 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 MTND4P7-201ENST00000523876 130 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 SUB1P1-201ENST00000524415 382 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN2P57739 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN2P57739 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN2P57739 AL157871.3-201ENST00000557231 293 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN2P57739 MIR5692A1-201ENST00000580523 69 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 MIR4424-201ENST00000585257 86 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN2P57739 uc_338.34-201ENST00000617467 174 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 AC006111.3-201ENST00000622137 383 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN2P57739 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN2P57739 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
CLDN2P57739 ASNSP3-201ENST00000451989 1306 ntBASIC3.13□□□□□ -1.91
CLDN2P57739 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN2P57739 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN2P57739 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN2P57739 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN2P57739 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN2P57739 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN2P57739 Y_RNA.33-201ENST00000362591 102 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CLDN2P57739 U3.26-201ENST00000391236 204 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms