Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SNORA41-201ENST00000384675 132 ntBASIC2.65□□□□□ -1.99
PEX3P56589 MRPL42P2-201ENST00000403169 426 ntBASIC2.65□□□□□ -1.99
PEX3P56589 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.65□□□□□ -1.99
PEX3P56589 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.65□□□□□ -1.99
PEX3P56589 RAC1P6-201ENST00000423911 575 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AL512844.2-201ENST00000433990 593 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RPS24P1-201ENST00000438550 371 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RPS12P2-201ENST00000439728 269 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC079448.1-201ENST00000449377 373 ntBASIC2.65□□□□□ -1.99
PEX3P56589 MTCYBP1-201ENST00000454315 1119 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RPL30P14-201ENST00000482744 348 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RPL36AP51-201ENST00000487216 318 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RN7SL636P-201ENST00000497504 294 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC234781.5-201ENST00000508429 271 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC026436.1-201ENST00000510537 270 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RPL23AP94-201ENST00000512518 302 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.65□□□□□ -1.99
PEX3P56589 RNU2-10P-201ENST00000516375 211 ntBASIC2.65□□□□□ -1.99
PEX3P56589 SNORA31.15-201ENST00000516771 132 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RNA5SP471-201ENST00000516971 106 ntBASIC2.65□□□□□ -1.99
PEX3P56589 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
PEX3P56589 AP000889.1-201ENST00000530968 660 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC021269.2-201ENST00000532318 330 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC024909.2-201ENST00000553035 286 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.65□□□□□ -1.99
PEX3P56589 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.65□□□□□ -1.99
PEX3P56589 MIR3609-201ENST00000582661 80 ntBASIC2.65□□□□□ -1.99
PEX3P56589 GLUD1P4-201ENST00000590914 418 ntBASIC2.65□□□□□ -1.99
PEX3P56589 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.65□□□□□ -1.99
PEX3P56589 AL670379.6-201ENST00000603753 252 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AL670379.11-201ENST00000604059 253 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC008162.1-201ENST00000604718 254 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC007363.1-201ENST00000604736 620 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AL670379.1-201ENST00000604752 252 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AL670379.5-201ENST00000605253 252 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AL670379.12-201ENST00000605291 253 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AL670379.8-201ENST00000605353 252 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AL670379.7-201ENST00000605823 252 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC098614.4-201ENST00000607601 462 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC046143.2-201ENST00000609789 160 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC034102.8-201ENST00000615146 484 ntBASIC2.65□□□□□ -1.99
PEX3P56589 AC010297.1-201ENST00000623948 149 ntBASIC2.65□□□□□ -1.99
PEX3P56589 MIR1291-201ENST00000627649 87 ntBASIC2.65□□□□□ -1.99
PEX3P56589 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.65□□□□□ -1.99
PEX3P56589 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.65□□□□□ -1.99
PEX3P56589 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
PEX3P56589 SNORD56.2-201ENST00000363242 71 ntBASIC2.64□□□□□ -1.99
PEX3P56589 SNORA14A-201ENST00000364773 135 ntBASIC2.64□□□□□ -1.99
PEX3P56589 RNU6-701P-201ENST00000384059 107 ntBASIC2.64□□□□□ -1.99
PEX3P56589 MIR558-201ENST00000384920 94 ntBASIC2.64□□□□□ -1.99
PEX3P56589 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PEX3P56589 RNA5SP252-201ENST00000391131 119 ntBASIC2.64□□□□□ -1.99
PEX3P56589 RNU2-8P-201ENST00000410727 190 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.64□□□□□ -1.99
PEX3P56589 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 C1DP2-201ENST00000418167 426 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AC016907.1-201ENST00000419483 435 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 ISCA1P1-201ENST00000426679 387 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AC137499.1-201ENST00000427602 88 ntBASIC2.64□□□□□ -1.99
PEX3P56589 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.64□□□□□ -1.99
PEX3P56589 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.64□□□□□ -1.99
PEX3P56589 AC119618.1-201ENST00000434191 222 ntBASIC2.64□□□□□ -1.99
PEX3P56589 KATNBL1P3-201ENST00000443475 909 ntBASIC2.64□□□□□ -1.99
PEX3P56589 UBBP3-201ENST00000445497 241 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 AC010099.1-201ENST00000455434 375 ntBASIC2.64□□□□□ -1.99
PEX3P56589 KLF3P2-201ENST00000465138 268 ntBASIC2.64□□□□□ -1.99
PEX3P56589 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.64□□□□□ -1.99
PEX3P56589 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.64□□□□□ -1.99
PEX3P56589 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.64□□□□□ -1.99
PEX3P56589 Vault.3-201ENST00000516676 95 ntBASIC2.64□□□□□ -1.99
PEX3P56589 RNU6-430P-201ENST00000517078 107 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.64□□□□□ -1.99
PEX3P56589 AC011979.2-201ENST00000527568 352 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.64□□□□□ -1.99
PEX3P56589 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.64□□□□□ -1.99
PEX3P56589 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.64□□□□□ -1.99
PEX3P56589 AC002545.1-201ENST00000592511 181 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AL161798.1-201ENST00000604630 131 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AL161729.4-201ENST00000604650 476 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AC064807.4-201ENST00000607201 407 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AC006566.1-201ENST00000608943 513 ntBASIC2.64□□□□□ -1.99
PEX3P56589 AC092656.1-203ENST00000624134 423 ntBASIC2.64□□□□□ -1.99
PEX3P56589 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.64□□□□□ -1.99
PEX3P56589 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.64□□□□□ -1.99
PEX3P56589 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.64□□□□□ -1.99
PEX3P56589 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
PEX3P56589 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PEX3P56589 RNU1-138P-201ENST00000384093 164 ntBASIC2.63□□□□□ -1.99
PEX3P56589 RNU6-1035P-201ENST00000384477 107 ntBASIC2.63□□□□□ -1.99
PEX3P56589 RNU6-817P-201ENST00000391083 104 ntBASIC2.63□□□□□ -1.99
PEX3P56589 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.63□□□□□ -1.99
PEX3P56589 AC093106.2-201ENST00000428212 385 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms