Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.1□□□□□ -2.07
CDH6P55285 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.1□□□□□ -2.07
CDH6P55285 AC016691.1-201ENST00000441321 413 ntBASIC2.1□□□□□ -2.07
CDH6P55285 AP001324.2-201ENST00000461163 319 ntBASIC2.1□□□□□ -2.07
CDH6P55285 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH6P55285 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH6P55285 AC022493.1-201ENST00000492984 337 ntBASIC2.1□□□□□ -2.07
CDH6P55285 AC139453.3-201ENST00000493276 369 ntBASIC2.1□□□□□ -2.07
CDH6P55285 RPL22P13-201ENST00000493291 347 ntBASIC2.1□□□□□ -2.07
CDH6P55285 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDH6P55285 UBE2V1P12-201ENST00000503954 474 ntBASIC2.1□□□□□ -2.07
CDH6P55285 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDH6P55285 MRPS33P3-201ENST00000513456 322 ntBASIC2.1□□□□□ -2.07
CDH6P55285 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH6P55285 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH6P55285 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.1□□□□□ -2.07
CDH6P55285 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDH6P55285 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH6P55285 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH6P55285 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH6P55285 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH6P55285 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH6P55285 VN1R82P-201ENST00000601481 356 ntBASIC2.1□□□□□ -2.07
CDH6P55285 MTCYBP22-201ENST00000603788 447 ntBASIC2.1□□□□□ -2.07
CDH6P55285 AC106052.1-201ENST00000608029 497 ntBASIC2.1□□□□□ -2.07
CDH6P55285 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH6P55285 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDH6P55285 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.1□□□□□ -2.07
CDH6P55285 AC092881.1-201ENST00000638218 2733 ntBASIC2.1□□□□□ -2.07
CDH6P55285 AC104454.1-201ENST00000421341 1401 ntBASIC2.09□□□□□ -2.07
CDH6P55285 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH6P55285 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH6P55285 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDH6P55285 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDH6P55285 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
CDH6P55285 RNU6-769P-201ENST00000384407 104 ntBASIC2.09□□□□□ -2.07
CDH6P55285 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
CDH6P55285 RNU6-757P-201ENST00000410334 100 ntBASIC2.09□□□□□ -2.07
CDH6P55285 PIGPP2-201ENST00000411569 458 ntBASIC2.09□□□□□ -2.07
CDH6P55285 ELOCP9-201ENST00000418624 239 ntBASIC2.09□□□□□ -2.07
CDH6P55285 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH6P55285 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH6P55285 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH6P55285 MTCO2P23-201ENST00000425216 680 ntBASIC2.09□□□□□ -2.07
CDH6P55285 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.09□□□□□ -2.07
CDH6P55285 AL009048.1-201ENST00000450437 298 ntBASIC2.09□□□□□ -2.07
CDH6P55285 AC068781.1-201ENST00000488231 618 ntBASIC2.09□□□□□ -2.07
CDH6P55285 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.09□□□□□ -2.07
CDH6P55285 MTND2P7-201ENST00000521337 640 ntBASIC2.09□□□□□ -2.07
CDH6P55285 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.09□□□□□ -2.07
CDH6P55285 RPS3AP4-201ENST00000555161 764 ntBASIC2.09□□□□□ -2.07
CDH6P55285 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH6P55285 MIR544B-201ENST00000582372 78 ntBASIC2.09□□□□□ -2.07
CDH6P55285 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.09□□□□□ -2.07
CDH6P55285 BNIP3P23-201ENST00000599655 511 ntBASIC2.09□□□□□ -2.07
CDH6P55285 AL391834.2-201ENST00000609982 546 ntBASIC2.09□□□□□ -2.07
CDH6P55285 U4atac.1-201ENST00000618345 95 ntBASIC2.09□□□□□ -2.07
CDH6P55285 AC244517.12-201ENST00000623581 663 ntBASIC2.09□□□□□ -2.07
CDH6P55285 AP003400.5-201ENST00000624827 617 ntBASIC2.09□□□□□ -2.07
CDH6P55285 AP000553.5-201ENST00000641933 54 ntBASIC2.09□□□□□ -2.07
CDH6P55285 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH6P55285 RNU6-748P-201ENST00000384648 107 ntBASIC2.08□□□□□ -2.08
CDH6P55285 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
CDH6P55285 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDH6P55285 RN7SKP158-201ENST00000410453 326 ntBASIC2.08□□□□□ -2.08
CDH6P55285 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
CDH6P55285 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH6P55285 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH6P55285 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
CDH6P55285 VPS26BP1-201ENST00000417155 755 ntBASIC2.08□□□□□ -2.08
CDH6P55285 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH6P55285 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH6P55285 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH6P55285 AC093106.2-201ENST00000428212 385 ntBASIC2.08□□□□□ -2.08
CDH6P55285 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH6P55285 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDH6P55285 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH6P55285 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH6P55285 RPL23AP35-201ENST00000451906 501 ntBASIC2.08□□□□□ -2.08
CDH6P55285 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH6P55285 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.08□□□□□ -2.08
CDH6P55285 AC008526.1-201ENST00000509149 338 ntBASIC2.08□□□□□ -2.08
CDH6P55285 AF213884.2-201ENST00000510417 903 ntBASIC2.08□□□□□ -2.08
CDH6P55285 RNU7-193P-201ENST00000516723 65 ntBASIC2.08□□□□□ -2.08
CDH6P55285 RNU6-1183P-201ENST00000517054 60 ntBASIC2.08□□□□□ -2.08
CDH6P55285 HSPE1P18-201ENST00000517602 280 ntBASIC2.08□□□□□ -2.08
CDH6P55285 AP006587.4-201ENST00000526053 529 ntBASIC2.08□□□□□ -2.08
CDH6P55285 AC013828.2-201ENST00000532487 235 ntBASIC2.08□□□□□ -2.08
CDH6P55285 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CDH6P55285 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.08□□□□□ -2.08
CDH6P55285 AC090970.3-201ENST00000612566 866 ntBASIC2.08□□□□□ -2.08
CDH6P55285 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.08□□□□□ -2.08
CDH6P55285 AL109620.1-201ENST00000618738 1197 ntBASIC2.08□□□□□ -2.08
CDH6P55285 AC013470.4-201ENST00000619978 986 ntBASIC2.08□□□□□ -2.08
CDH6P55285 AC091965.5-201ENST00000624785 342 ntBASIC2.08□□□□□ -2.08
CDH6P55285 U6.99-201ENST00000637524 83 ntBASIC2.08□□□□□ -2.08
CDH6P55285 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.08□□□□□ -2.08
CDH6P55285 KPNA2P1-201ENST00000458289 1591 ntBASIC2.07□□□□□ -2.08
CDH6P55285 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CDH6P55285 U8.2-201ENST00000363156 134 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms