Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.66□□□□□ -1.98
VCPP55072 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VCPP55072 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
VCPP55072 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.98
VCPP55072 Y_RNA.118-201ENST00000363300 101 ntBASIC2.65□□□□□ -1.99
VCPP55072 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
VCPP55072 RNU6-741P-201ENST00000383889 107 ntBASIC2.65□□□□□ -1.99
VCPP55072 RNU1-138P-201ENST00000384093 164 ntBASIC2.65□□□□□ -1.99
VCPP55072 MIR518C-201ENST00000384822 101 ntBASIC2.65□□□□□ -1.99
VCPP55072 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
VCPP55072 AL359634.1-202ENST00000404721 284 ntBASIC2.65□□□□□ -1.99
VCPP55072 USP9YP13-201ENST00000417797 480 ntBASIC2.65□□□□□ -1.99
VCPP55072 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.65□□□□□ -1.99
VCPP55072 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.65□□□□□ -1.99
VCPP55072 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.65□□□□□ -1.99
VCPP55072 PIGFP3-201ENST00000441918 722 ntBASIC2.65□□□□□ -1.99
VCPP55072 AC090096.1-201ENST00000489168 390 ntBASIC2.65□□□□□ -1.99
VCPP55072 RPS27P27-201ENST00000498779 255 ntBASIC2.65□□□□□ -1.99
VCPP55072 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.65□□□□□ -1.99
VCPP55072 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.65□□□□□ -1.99
VCPP55072 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.65□□□□□ -1.99
VCPP55072 AC022616.6-201ENST00000520479 119 ntBASIC2.65□□□□□ -1.99
VCPP55072 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.65□□□□□ -1.99
VCPP55072 SUB1P1-201ENST00000524415 382 ntBASIC2.65□□□□□ -1.99
VCPP55072 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.65□□□□□ -1.99
VCPP55072 TRAV28-201ENST00000557548 323 ntBASIC2.65□□□□□ -1.99
VCPP55072 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.65□□□□□ -1.99
VCPP55072 AC025281.1-201ENST00000567026 265 ntBASIC2.65□□□□□ -1.99
VCPP55072 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.65□□□□□ -1.99
VCPP55072 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.65□□□□□ -1.99
VCPP55072 MIR7515-201ENST00000637837 67 ntBASIC2.65□□□□□ -1.99
VCPP55072 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
VCPP55072 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
VCPP55072 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VCPP55072 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VCPP55072 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
VCPP55072 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
VCPP55072 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VCPP55072 Y_RNA.140-201ENST00000363474 103 ntBASIC2.64□□□□□ -1.99
VCPP55072 RNU5E-5P-201ENST00000365379 116 ntBASIC2.64□□□□□ -1.99
VCPP55072 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPP55072 RNU6-217P-201ENST00000384164 104 ntBASIC2.64□□□□□ -1.99
VCPP55072 AL079342.1-201ENST00000401460 267 ntBASIC2.64□□□□□ -1.99
VCPP55072 Y_RNA.608-201ENST00000410647 95 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC007064.1-201ENST00000412238 351 ntBASIC2.64□□□□□ -1.99
VCPP55072 RPL17P12-201ENST00000413391 526 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC080125.1-201ENST00000414888 684 ntBASIC2.64□□□□□ -1.99
VCPP55072 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPP55072 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPP55072 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.64□□□□□ -1.99
VCPP55072 AC007919.1-201ENST00000429380 217 ntBASIC2.64□□□□□ -1.99
VCPP55072 AL356320.1-201ENST00000429616 163 ntBASIC2.64□□□□□ -1.99
VCPP55072 MTATP6P17-201ENST00000431030 672 ntBASIC2.64□□□□□ -1.99
VCPP55072 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.64□□□□□ -1.99
VCPP55072 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
VCPP55072 MTATP6P30-201ENST00000443540 664 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC020550.1-201ENST00000447385 163 ntBASIC2.64□□□□□ -1.99
VCPP55072 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPP55072 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.64□□□□□ -1.99
VCPP55072 RN7SL636P-201ENST00000497504 294 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC114786.4-201ENST00000508771 728 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPP55072 AC114797.1-201ENST00000514003 728 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC007834.2-201ENST00000536310 343 ntBASIC2.64□□□□□ -1.99
VCPP55072 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPP55072 OSBPL9P5-201ENST00000542581 171 ntBASIC2.64□□□□□ -1.99
VCPP55072 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPP55072 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC121334.2-201ENST00000605387 271 ntBASIC2.64□□□□□ -1.99
VCPP55072 AL031775.1-201ENST00000607014 887 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC012360.2-201ENST00000609349 391 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC046143.2-201ENST00000609789 160 ntBASIC2.64□□□□□ -1.99
VCPP55072 U4.3-201ENST00000621047 82 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC078883.4-201ENST00000623218 367 ntBASIC2.64□□□□□ -1.99
VCPP55072 AC091931.1-201ENST00000623488 728 ntBASIC2.64□□□□□ -1.99
VCPP55072 MTND1P37-201ENST00000636562 264 ntBASIC2.64□□□□□ -1.99
VCPP55072 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.64□□□□□ -1.99
VCPP55072 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VCPP55072 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.64□□□□□ -1.99
VCPP55072 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VCPP55072 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
VCPP55072 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.63□□□□□ -1.99
VCPP55072 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCPP55072 MIR6073-201ENST00000352083 89 ntBASIC2.63□□□□□ -1.99
VCPP55072 RNU6-1284P-201ENST00000363701 100 ntBASIC2.63□□□□□ -1.99
VCPP55072 SNORA67.1-201ENST00000364749 141 ntBASIC2.63□□□□□ -1.99
VCPP55072 RNY3P13-201ENST00000365542 102 ntBASIC2.63□□□□□ -1.99
VCPP55072 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.63□□□□□ -1.99
VCPP55072 RNU6-1072P-201ENST00000384703 107 ntBASIC2.63□□□□□ -1.99
VCPP55072 RNU6-443P-201ENST00000384780 107 ntBASIC2.63□□□□□ -1.99
VCPP55072 RNU2-33P-201ENST00000410344 192 ntBASIC2.63□□□□□ -1.99
VCPP55072 ELOCP17-201ENST00000414751 326 ntBASIC2.63□□□□□ -1.99
VCPP55072 AC244035.1-201ENST00000430042 390 ntBASIC2.63□□□□□ -1.99
VCPP55072 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.63□□□□□ -1.99
VCPP55072 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VCPP55072 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.63□□□□□ -1.99
VCPP55072 UBE2D3P4-201ENST00000441973 436 ntBASIC2.63□□□□□ -1.99
VCPP55072 AC104389.3-201ENST00000445629 235 ntBASIC2.63□□□□□ -1.99
VCPP55072 COX6CP12-201ENST00000446748 202 ntBASIC2.63□□□□□ -1.99
VCPP55072 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms