Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.93□□□□□ -1.94
LIMK1P53667 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.93□□□□□ -1.94
LIMK1P53667 AC069234.5-201ENST00000611056 416 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 AC243829.7-201ENST00000633081 225 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 LRRC77P-213ENST00000637727 880 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
LIMK1P53667 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
LIMK1P53667 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIMK1P53667 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LIMK1P53667 RNU6-190P-201ENST00000384154 102 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 MIR181B1-201ENST00000385240 110 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 SNORD67-201ENST00000390833 111 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LIMK1P53667 MIR888-201ENST00000401186 77 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AL513475.1-201ENST00000406602 315 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 RPL32P35-201ENST00000415214 394 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 C1DP2-201ENST00000418167 426 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.92□□□□□ -1.94
LIMK1P53667 AL592045.1-201ENST00000429867 352 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 RPL31P35-201ENST00000431058 377 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AL591212.2-201ENST00000433923 257 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.92□□□□□ -1.94
LIMK1P53667 AC009961.2-201ENST00000435771 251 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AL360221.1-201ENST00000445989 335 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 Z83846.1-201ENST00000446798 265 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.92□□□□□ -1.94
LIMK1P53667 SNORD109B-201ENST00000458961 67 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 SNORD109A-201ENST00000459128 67 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 MRPS17P3-201ENST00000465453 385 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 RAP1BP2-201ENST00000478270 544 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 RPS29P20-201ENST00000489592 171 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.92□□□□□ -1.94
LIMK1P53667 AC114786.4-201ENST00000508771 728 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AC117522.1-201ENST00000509821 380 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 MRPS36P2-201ENST00000512569 299 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 Y_RNA.689-201ENST00000516589 107 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AC079600.2-201ENST00000550076 130 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.92□□□□□ -1.94
LIMK1P53667 AL391261.3-201ENST00000557194 520 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 MIR3167-201ENST00000579623 85 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 MIR3616-201ENST00000584070 92 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 PIGPP4-201ENST00000584447 307 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 HMGN2P15-201ENST00000585707 270 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AL358072.1-201ENST00000604156 575 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AL451064.1-201ENST00000607718 471 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AC008498.1-201ENST00000613012 531 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AC010678.1-201ENST00000614118 713 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AC130324.3-201ENST00000614165 542 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.92□□□□□ -1.94
LIMK1P53667 AL512643.1-201ENST00000635735 524 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 AC090582.1-201ENST00000636321 199 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIMK1P53667 AC092447.7-201ENST00000422212 1621 ntBASIC2.92□□□□□ -1.94
LIMK1P53667 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
LIMK1P53667 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIMK1P53667 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LIMK1P53667 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
LIMK1P53667 SNORA18.3-201ENST00000384122 132 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 Y_RNA.553-201ENST00000384670 102 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LIMK1P53667 AL360182.1-201ENST00000397433 468 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 RNU2-39P-201ENST00000410604 198 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.91□□□□□ -1.94
LIMK1P53667 MTCO2P34-201ENST00000421994 607 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.91□□□□□ -1.94
LIMK1P53667 RPL23AP30-201ENST00000432419 501 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.91□□□□□ -1.94
LIMK1P53667 KATNBL1P3-201ENST00000443475 909 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.91□□□□□ -1.94
LIMK1P53667 RN7SL499P-201ENST00000481141 276 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC007182.2-201ENST00000489251 402 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 ARL2BPP4-201ENST00000506854 471 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC008716.1-201ENST00000511084 513 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.91□□□□□ -1.94
LIMK1P53667 RN7SKP43-201ENST00000516173 320 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 RNA5SP24-201ENST00000516478 95 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.91□□□□□ -1.94
LIMK1P53667 AC022634.1-201ENST00000520765 532 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC174048.1-201ENST00000603389 144 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC245014.2-201ENST00000603689 287 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC064872.1-201ENST00000604823 1072 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC246785.4-201ENST00000605374 287 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC022893.3-201ENST00000607665 437 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC006566.1-201ENST00000608943 513 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.91□□□□□ -1.94
LIMK1P53667 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AC072046.2-201ENST00000618366 268 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.91□□□□□ -1.94
LIMK1P53667 MTND5P42-201ENST00000637720 498 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
LIMK1P53667 ASNSP3-201ENST00000451989 1306 ntBASIC2.91□□□□□ -1.94
LIMK1P53667 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.9□□□□□ -1.94
LIMK1P53667 AL137003.2-201ENST00000606924 2538 ntBASIC2.9□□□□□ -1.94
LIMK1P53667 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
LIMK1P53667 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.94
LIMK1P53667 RNU6-461P-201ENST00000364195 107 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms