Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COPAP53621 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COPAP53621 Y_RNA.279-201ENST00000364763 95 ntBASIC3.61□□□□□ -1.83
COPAP53621 Y_RNA.534-201ENST00000384599 112 ntBASIC3.61□□□□□ -1.83
COPAP53621 MIR514A2-201ENST00000385131 88 ntBASIC3.61□□□□□ -1.83
COPAP53621 MIR514A3-201ENST00000385132 88 ntBASIC3.61□□□□□ -1.83
COPAP53621 AL162578.1-201ENST00000406202 378 ntBASIC3.61□□□□□ -1.83
COPAP53621 RAP1BP3-201ENST00000407180 549 ntBASIC3.61□□□□□ -1.83
COPAP53621 RNU4-26P-201ENST00000410270 107 ntBASIC3.61□□□□□ -1.83
COPAP53621 RNA5SP38-201ENST00000410750 119 ntBASIC3.61□□□□□ -1.83
COPAP53621 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.61□□□□□ -1.83
COPAP53621 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.61□□□□□ -1.83
COPAP53621 ARL5AP1-201ENST00000418991 388 ntBASIC3.61□□□□□ -1.83
COPAP53621 ZNF863P-201ENST00000426746 417 ntBASIC3.61□□□□□ -1.83
COPAP53621 AL158071.1-201ENST00000430315 461 ntBASIC3.61□□□□□ -1.83
COPAP53621 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.61□□□□□ -1.83
COPAP53621 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.61□□□□□ -1.83
COPAP53621 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.61□□□□□ -1.83
COPAP53621 AC104472.2-201ENST00000469035 601 ntBASIC3.61□□□□□ -1.83
COPAP53621 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.61□□□□□ -1.83
COPAP53621 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.61□□□□□ -1.83
COPAP53621 AC106782.4-201ENST00000568264 210 ntBASIC3.61□□□□□ -1.83
COPAP53621 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COPAP53621 MIR5195-201ENST00000583555 115 ntBASIC3.61□□□□□ -1.83
COPAP53621 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.61□□□□□ -1.83
COPAP53621 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.61□□□□□ -1.83
COPAP53621 MIR7851-201ENST00000610611 160 ntBASIC3.61□□□□□ -1.83
COPAP53621 AC093913.1-201ENST00000614178 329 ntBASIC3.61□□□□□ -1.83
COPAP53621 Y_RNA.804-201ENST00000615262 101 ntBASIC3.61□□□□□ -1.83
COPAP53621 AC104260.1-201ENST00000616660 539 ntBASIC3.61□□□□□ -1.83
COPAP53621 AC027309.3-201ENST00000623419 351 ntBASIC3.61□□□□□ -1.83
COPAP53621 AL049641.1-201ENST00000441055 1948 ntBASIC3.61□□□□□ -1.83
COPAP53621 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COPAP53621 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COPAP53621 FAM35BP-202ENST00000497389 3337 ntBASIC3.6□□□□□ -1.83
COPAP53621 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COPAP53621 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COPAP53621 RNU4-35P-201ENST00000362588 141 ntBASIC3.6□□□□□ -1.83
COPAP53621 RNU4-20P-201ENST00000365601 151 ntBASIC3.6□□□□□ -1.83
COPAP53621 RNU6-38P-201ENST00000384085 107 ntBASIC3.6□□□□□ -1.83
COPAP53621 MIR301A-201ENST00000385261 86 ntBASIC3.6□□□□□ -1.83
COPAP53621 RNU6-1009P-201ENST00000390996 107 ntBASIC3.6□□□□□ -1.83
COPAP53621 AL592114.1-201ENST00000403842 483 ntBASIC3.6□□□□□ -1.83
COPAP53621 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.6□□□□□ -1.83
COPAP53621 RPL31P12-201ENST00000422587 358 ntBASIC3.6□□□□□ -1.83
COPAP53621 AL591704.1-201ENST00000432574 275 ntBASIC3.6□□□□□ -1.83
COPAP53621 AL671855.1-201ENST00000446875 1203 ntBASIC3.6□□□□□ -1.83
COPAP53621 CECR9-201ENST00000453421 199 ntBASIC3.6□□□□□ -1.83
COPAP53621 RNU6-333P-201ENST00000459117 107 ntBASIC3.6□□□□□ -1.83
COPAP53621 AP000852.1-201ENST00000472460 573 ntBASIC3.6□□□□□ -1.83
COPAP53621 AC025518.1-201ENST00000479856 347 ntBASIC3.6□□□□□ -1.83
COPAP53621 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.6□□□□□ -1.83
COPAP53621 AC114781.4-201ENST00000513707 639 ntBASIC3.6□□□□□ -1.83
COPAP53621 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.6□□□□□ -1.83
COPAP53621 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.6□□□□□ -1.83
COPAP53621 NDUFB9P3-201ENST00000521269 501 ntBASIC3.6□□□□□ -1.83
COPAP53621 PSMA2P1-201ENST00000526365 646 ntBASIC3.6□□□□□ -1.83
COPAP53621 AC078814.3-201ENST00000553036 491 ntBASIC3.6□□□□□ -1.83
COPAP53621 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COPAP53621 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
COPAP53621 MIR4424-201ENST00000585257 86 ntBASIC3.6□□□□□ -1.83
COPAP53621 RNU6-89P-201ENST00000606519 100 ntBASIC3.6□□□□□ -1.83
COPAP53621 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.6□□□□□ -1.83
COPAP53621 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.6□□□□□ -1.83
COPAP53621 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COPAP53621 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
COPAP53621 AC058791.1-201ENST00000608412 3198 ntBASIC3.59□□□□□ -1.83
COPAP53621 SNORA4.3-201ENST00000365564 137 ntBASIC3.59□□□□□ -1.83
COPAP53621 RNU6-767P-201ENST00000384132 107 ntBASIC3.59□□□□□ -1.83
COPAP53621 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COPAP53621 RNU6-55P-201ENST00000411092 107 ntBASIC3.59□□□□□ -1.83
COPAP53621 RNU6-954P-201ENST00000411355 107 ntBASIC3.59□□□□□ -1.83
COPAP53621 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.59□□□□□ -1.83
COPAP53621 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.59□□□□□ -1.83
COPAP53621 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.59□□□□□ -1.83
COPAP53621 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.59□□□□□ -1.83
COPAP53621 RPS24P13-201ENST00000442520 397 ntBASIC3.59□□□□□ -1.83
COPAP53621 SNRPEP8-201ENST00000442866 260 ntBASIC3.59□□□□□ -1.83
COPAP53621 FABP5P15-201ENST00000453566 214 ntBASIC3.59□□□□□ -1.83
COPAP53621 HMGN2P26-201ENST00000463169 339 ntBASIC3.59□□□□□ -1.83
COPAP53621 RN7SL601P-201ENST00000471221 293 ntBASIC3.59□□□□□ -1.83
COPAP53621 HMGN1P12-201ENST00000499125 195 ntBASIC3.59□□□□□ -1.83
COPAP53621 AC091951.2-201ENST00000500762 203 ntBASIC3.59□□□□□ -1.83
COPAP53621 RNU6-507P-201ENST00000516045 100 ntBASIC3.59□□□□□ -1.83
COPAP53621 RNU6-1282P-201ENST00000516735 96 ntBASIC3.59□□□□□ -1.83
COPAP53621 RNU6-579P-201ENST00000516879 102 ntBASIC3.59□□□□□ -1.83
COPAP53621 AC023050.3-201ENST00000541142 333 ntBASIC3.59□□□□□ -1.83
COPAP53621 AC011602.1-201ENST00000546484 331 ntBASIC3.59□□□□□ -1.83
COPAP53621 DNAJC8P1-201ENST00000554535 372 ntBASIC3.59□□□□□ -1.83
COPAP53621 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.59□□□□□ -1.83
COPAP53621 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.59□□□□□ -1.83
COPAP53621 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.59□□□□□ -1.83
COPAP53621 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.59□□□□□ -1.83
COPAP53621 LARP7P1-201ENST00000605576 316 ntBASIC3.59□□□□□ -1.83
COPAP53621 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.59□□□□□ -1.83
COPAP53621 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
COPAP53621 AC099654.5-201ENST00000636479 350 ntBASIC3.59□□□□□ -1.83
COPAP53621 MIR7153-201ENST00000637758 57 ntBASIC3.59□□□□□ -1.83
COPAP53621 AL732372.2-225ENST00000642124 456 ntBASIC3.59□□□□□ -1.83
COPAP53621 AC007496.3-201ENST00000624987 3443 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms