Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.86□□□□□ -1.95
PDX1P52945 OR2B8P-201ENST00000432841 938 ntBASIC2.86□□□□□ -1.95
PDX1P52945 HIGD1AP11-201ENST00000438361 280 ntBASIC2.86□□□□□ -1.95
PDX1P52945 ELOCP7-201ENST00000439968 331 ntBASIC2.86□□□□□ -1.95
PDX1P52945 FTH1P25-201ENST00000447665 469 ntBASIC2.86□□□□□ -1.95
PDX1P52945 UQCRHP3-201ENST00000451503 251 ntBASIC2.86□□□□□ -1.95
PDX1P52945 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.86□□□□□ -1.95
PDX1P52945 RNU6-953P-201ENST00000459154 107 ntBASIC2.86□□□□□ -1.95
PDX1P52945 AC146507.2-201ENST00000460608 476 ntBASIC2.86□□□□□ -1.95
PDX1P52945 RN7SL75P-201ENST00000461926 281 ntBASIC2.86□□□□□ -1.95
PDX1P52945 RN7SL20P-201ENST00000488827 297 ntBASIC2.86□□□□□ -1.95
PDX1P52945 AC083906.5-201ENST00000503722 328 ntBASIC2.86□□□□□ -1.95
PDX1P52945 ARL4AP2-201ENST00000507378 601 ntBASIC2.86□□□□□ -1.95
PDX1P52945 AC098591.2-201ENST00000510152 315 ntBASIC2.86□□□□□ -1.95
PDX1P52945 RNU6-914P-201ENST00000516749 109 ntBASIC2.86□□□□□ -1.95
PDX1P52945 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.86□□□□□ -1.95
PDX1P52945 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.86□□□□□ -1.95
PDX1P52945 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.86□□□□□ -1.95
PDX1P52945 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.86□□□□□ -1.95
PDX1P52945 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.86□□□□□ -1.95
PDX1P52945 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.86□□□□□ -1.95
PDX1P52945 HMGB1P6-201ENST00000569046 646 ntBASIC2.86□□□□□ -1.95
PDX1P52945 MIR3609-201ENST00000582661 80 ntBASIC2.86□□□□□ -1.95
PDX1P52945 AC008521.1-201ENST00000587471 187 ntBASIC2.86□□□□□ -1.95
PDX1P52945 AC008752.3-201ENST00000588113 712 ntBASIC2.86□□□□□ -1.95
PDX1P52945 MIR15A-201ENST00000607334 83 ntBASIC2.86□□□□□ -1.95
PDX1P52945 AC122108.2-201ENST00000611946 526 ntBASIC2.86□□□□□ -1.95
PDX1P52945 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.86□□□□□ -1.95
PDX1P52945 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.86□□□□□ -1.95
PDX1P52945 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDX1P52945 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDX1P52945 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PDX1P52945 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDX1P52945 AC103710.2-202ENST00000641454 2853 ntBASIC2.85□□□□□ -1.95
PDX1P52945 MAPK10-322ENST00000641485 4530 ntBASIC2.85□□□□□ -1.95
PDX1P52945 SNORD115-7-201ENST00000365306 82 ntBASIC2.85□□□□□ -1.95
PDX1P52945 RNU4-48P-201ENST00000365559 182 ntBASIC2.85□□□□□ -1.95
PDX1P52945 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PDX1P52945 CISD1P1-201ENST00000393907 327 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AL591416.1-201ENST00000404015 867 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AL031779.1-201ENST00000415663 330 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AC099548.1-201ENST00000421443 426 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AL645937.1-202ENST00000421799 937 ntBASIC2.85□□□□□ -1.95
PDX1P52945 TRIAP1P1-201ENST00000427062 225 ntBASIC2.85□□□□□ -1.95
PDX1P52945 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.85□□□□□ -1.95
PDX1P52945 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.85□□□□□ -1.95
PDX1P52945 AC093392.2-201ENST00000450682 337 ntBASIC2.85□□□□□ -1.95
PDX1P52945 FDX1P2-201ENST00000450769 375 ntBASIC2.85□□□□□ -1.95
PDX1P52945 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.85□□□□□ -1.95
PDX1P52945 RPL39P36-201ENST00000490784 156 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AC019235.1-201ENST00000503847 207 ntBASIC2.85□□□□□ -1.95
PDX1P52945 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.85□□□□□ -1.95
PDX1P52945 AP001893.2-201ENST00000526949 202 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PDX1P52945 AK6P1-201ENST00000540219 478 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.85□□□□□ -1.95
PDX1P52945 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.85□□□□□ -1.95
PDX1P52945 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.85□□□□□ -1.95
PDX1P52945 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.85□□□□□ -1.95
PDX1P52945 TPRKBP2-201ENST00000565969 475 ntBASIC2.85□□□□□ -1.95
PDX1P52945 MIR4775-201ENST00000581168 75 ntBASIC2.85□□□□□ -1.95
PDX1P52945 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDX1P52945 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.85□□□□□ -1.95
PDX1P52945 AC004805.2-201ENST00000605382 482 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AL158032.1-201ENST00000605401 106 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AC008536.2-201ENST00000607284 349 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AC006111.3-201ENST00000622137 383 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AC011155.2-201ENST00000623202 216 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AC139792.3-201ENST00000623525 224 ntBASIC2.85□□□□□ -1.95
PDX1P52945 MTND5P17-201ENST00000418405 1603 ntBASIC2.85□□□□□ -1.95
PDX1P52945 AL136360.1-201ENST00000503377 1900 ntBASIC2.85□□□□□ -1.95
PDX1P52945 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.85□□□□□ -1.95
PDX1P52945 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
PDX1P52945 AC093831.2-201ENST00000624393 3427 ntBASIC2.84□□□□□ -1.95
PDX1P52945 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.84□□□□□ -1.95
PDX1P52945 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.84□□□□□ -1.95
PDX1P52945 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.84□□□□□ -1.95
PDX1P52945 RNU6-1120P-201ENST00000362988 108 ntBASIC2.84□□□□□ -1.95
PDX1P52945 RNU6-1029P-201ENST00000384109 107 ntBASIC2.84□□□□□ -1.95
PDX1P52945 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PDX1P52945 RNU6-1158P-201ENST00000391167 107 ntBASIC2.84□□□□□ -1.95
PDX1P52945 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.84□□□□□ -1.95
PDX1P52945 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.84□□□□□ -1.95
PDX1P52945 GPM6BP2-201ENST00000432046 144 ntBASIC2.84□□□□□ -1.95
PDX1P52945 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.84□□□□□ -1.95
PDX1P52945 RPL36AP53-201ENST00000432891 316 ntBASIC2.84□□□□□ -1.95
PDX1P52945 HMGN2P20-201ENST00000437531 273 ntBASIC2.84□□□□□ -1.95
PDX1P52945 GPM6BP1-201ENST00000446387 144 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AL109933.2-201ENST00000452651 260 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AC022364.2-201ENST00000457963 554 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AC006512.1-201ENST00000468816 291 ntBASIC2.84□□□□□ -1.95
PDX1P52945 HMGN2P13-201ENST00000476476 274 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AC233702.1-201ENST00000482905 502 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AC092436.1-201ENST00000506450 503 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AC117522.3-201ENST00000507974 584 ntBASIC2.84□□□□□ -1.95
PDX1P52945 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.84□□□□□ -1.95
PDX1P52945 SNORA31.1-201ENST00000515993 133 ntBASIC2.84□□□□□ -1.95
PDX1P52945 SNORA31.5-201ENST00000516190 133 ntBASIC2.84□□□□□ -1.95
PDX1P52945 RNA5SP165-201ENST00000517142 115 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms