Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU6-550P-201ENST00000391057 101 ntBASIC4.26□□□□□ -1.73
MRE11P49959 MTCYBP4-201ENST00000401524 249 ntBASIC4.26□□□□□ -1.73
MRE11P49959 RNA5SP56-201ENST00000410277 118 ntBASIC4.26□□□□□ -1.73
MRE11P49959 RNU4-65P-201ENST00000410473 140 ntBASIC4.26□□□□□ -1.73
MRE11P49959 RNU6-387P-201ENST00000411331 105 ntBASIC4.26□□□□□ -1.73
MRE11P49959 RPL37P10-201ENST00000412884 288 ntBASIC4.26□□□□□ -1.73
MRE11P49959 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.26□□□□□ -1.73
MRE11P49959 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.26□□□□□ -1.73
MRE11P49959 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.26□□□□□ -1.73
MRE11P49959 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.26□□□□□ -1.73
MRE11P49959 RPS3AP46-201ENST00000448352 682 ntBASIC4.26□□□□□ -1.73
MRE11P49959 AC125238.1-201ENST00000448842 249 ntBASIC4.26□□□□□ -1.73
MRE11P49959 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.26□□□□□ -1.73
MRE11P49959 RPL21P93-201ENST00000480465 489 ntBASIC4.26□□□□□ -1.73
MRE11P49959 TRBVA-201ENST00000498804 316 ntBASIC4.26□□□□□ -1.73
MRE11P49959 RAC1P2-201ENST00000511164 579 ntBASIC4.26□□□□□ -1.73
MRE11P49959 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.26□□□□□ -1.73
MRE11P49959 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.26□□□□□ -1.73
MRE11P49959 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.26□□□□□ -1.73
MRE11P49959 MIR3672-201ENST00000584290 82 ntBASIC4.26□□□□□ -1.73
MRE11P49959 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.26□□□□□ -1.73
MRE11P49959 AC092747.3-201ENST00000603769 301 ntBASIC4.26□□□□□ -1.73
MRE11P49959 IGHV3-29-201ENST00000604817 344 ntBASIC4.26□□□□□ -1.73
MRE11P49959 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.26□□□□□ -1.73
MRE11P49959 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MRE11P49959 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MRE11P49959 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.26□□□□□ -1.73
MRE11P49959 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.26□□□□□ -1.73
MRE11P49959 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.26□□□□□ -1.73
MRE11P49959 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MRE11P49959 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MRE11P49959 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
MRE11P49959 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
MRE11P49959 Y_RNA.145-201ENST00000363527 102 ntBASIC4.25□□□□□ -1.73
MRE11P49959 SNORA7.2-201ENST00000364446 145 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RNA5SP267-201ENST00000364893 126 ntBASIC4.25□□□□□ -1.73
MRE11P49959 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
MRE11P49959 U1.1-201ENST00000384101 164 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RNU4-6P-201ENST00000410804 122 ntBASIC4.25□□□□□ -1.73
MRE11P49959 HSPE1P12-201ENST00000412576 301 ntBASIC4.25□□□□□ -1.73
MRE11P49959 AC017079.2-201ENST00000416102 485 ntBASIC4.25□□□□□ -1.73
MRE11P49959 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.25□□□□□ -1.73
MRE11P49959 RAC1P6-201ENST00000423911 575 ntBASIC4.25□□□□□ -1.73
MRE11P49959 AC005019.1-201ENST00000436455 431 ntBASIC4.25□□□□□ -1.73
MRE11P49959 SNORA71B-202ENST00000439232 272 ntBASIC4.25□□□□□ -1.73
MRE11P49959 HMGN2P7-201ENST00000456186 273 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RPL21P8-201ENST00000465083 535 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RN7SL432P-201ENST00000484057 298 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RPL31P13-201ENST00000484151 370 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RPL39P5-202ENST00000512505 151 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RN7SKP24-201ENST00000515888 284 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RNU6-256P-201ENST00000516747 97 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RNU6-685P-201ENST00000517088 95 ntBASIC4.25□□□□□ -1.73
MRE11P49959 RNA5SP454-201ENST00000517231 127 ntBASIC4.25□□□□□ -1.73
MRE11P49959 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.25□□□□□ -1.73
MRE11P49959 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MRE11P49959 MIR4790-201ENST00000577799 79 ntBASIC4.25□□□□□ -1.73
MRE11P49959 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.25□□□□□ -1.73
MRE11P49959 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.25□□□□□ -1.73
MRE11P49959 AL669831.4-202ENST00000590817 238 ntBASIC4.25□□□□□ -1.73
MRE11P49959 AC006254.3-201ENST00000603353 884 ntBASIC4.25□□□□□ -1.73
MRE11P49959 AC016925.2-201ENST00000605108 242 ntBASIC4.25□□□□□ -1.73
MRE11P49959 MIR6868-201ENST00000611215 58 ntBASIC4.25□□□□□ -1.73
MRE11P49959 TUG1_2.1-201ENST00000614234 87 ntBASIC4.25□□□□□ -1.73
MRE11P49959 SNHG22-203ENST00000617833 660 ntBASIC4.25□□□□□ -1.73
MRE11P49959 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.25□□□□□ -1.73
MRE11P49959 MTND5P42-201ENST00000637720 498 ntBASIC4.25□□□□□ -1.73
MRE11P49959 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.25□□□□□ -1.73
MRE11P49959 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MRE11P49959 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MRE11P49959 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MRE11P49959 Y_RNA.146-201ENST00000363549 102 ntBASIC4.24□□□□□ -1.73
MRE11P49959 Y_RNA.187-201ENST00000363918 113 ntBASIC4.24□□□□□ -1.73
MRE11P49959 Y_RNA.197-201ENST00000364004 102 ntBASIC4.24□□□□□ -1.73
MRE11P49959 EIF4E2P1-201ENST00000393781 255 ntBASIC4.24□□□□□ -1.73
MRE11P49959 HSPD1P21-201ENST00000436541 245 ntBASIC4.24□□□□□ -1.73
MRE11P49959 RPL23AP22-201ENST00000437556 453 ntBASIC4.24□□□□□ -1.73
MRE11P49959 MTND3P2-201ENST00000438452 342 ntBASIC4.24□□□□□ -1.73
MRE11P49959 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.24□□□□□ -1.73
MRE11P49959 GAPDHP27-201ENST00000447427 1020 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AL162389.1-201ENST00000449233 177 ntBASIC4.24□□□□□ -1.73
MRE11P49959 RPS11P1-201ENST00000451072 473 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AC234775.1-201ENST00000454247 670 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.24□□□□□ -1.73
MRE11P49959 RPL21P104-201ENST00000464143 478 ntBASIC4.24□□□□□ -1.73
MRE11P49959 RN7SL807P-201ENST00000470923 297 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AC092451.1-201ENST00000480211 153 ntBASIC4.24□□□□□ -1.73
MRE11P49959 RPL23AP55-201ENST00000498163 452 ntBASIC4.24□□□□□ -1.73
MRE11P49959 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.24□□□□□ -1.73
MRE11P49959 RBBP4P6-201ENST00000508098 202 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AC093303.1-201ENST00000514549 295 ntBASIC4.24□□□□□ -1.73
MRE11P49959 COPS8P3-201ENST00000526024 482 ntBASIC4.24□□□□□ -1.73
MRE11P49959 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.24□□□□□ -1.73
MRE11P49959 IMMP1LP2-201ENST00000552954 492 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AC008521.1-201ENST00000587471 187 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AL670379.6-201ENST00000603753 252 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AC008162.1-201ENST00000604718 254 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AL670379.1-201ENST00000604752 252 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AL670379.5-201ENST00000605253 252 ntBASIC4.24□□□□□ -1.73
MRE11P49959 AL670379.8-201ENST00000605353 252 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms