Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 FRG2DP-202ENST00000566967 323 ntBASIC3.2□□□□□ -1.9
SOX2P48431 MIR4425-201ENST00000580572 84 ntBASIC3.2□□□□□ -1.9
SOX2P48431 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.2□□□□□ -1.9
SOX2P48431 AC136601.2-201ENST00000604356 474 ntBASIC3.2□□□□□ -1.9
SOX2P48431 NUTF2P8-201ENST00000604593 363 ntBASIC3.2□□□□□ -1.9
SOX2P48431 AC004805.2-201ENST00000605382 482 ntBASIC3.2□□□□□ -1.9
SOX2P48431 AC005344.1-201ENST00000613391 459 ntBASIC3.2□□□□□ -1.9
SOX2P48431 AL355365.1-201ENST00000616480 294 ntBASIC3.2□□□□□ -1.9
SOX2P48431 MIR7641-1-201ENST00000627518 61 ntBASIC3.2□□□□□ -1.9
SOX2P48431 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.2□□□□□ -1.9
SOX2P48431 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.2□□□□□ -1.9
SOX2P48431 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SOX2P48431 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SOX2P48431 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.2□□□□□ -1.9
SOX2P48431 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.2□□□□□ -1.9
SOX2P48431 AC005183.1-201ENST00000603687 1979 ntBASIC3.2□□□□□ -1.9
SOX2P48431 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SOX2P48431 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.19□□□□□ -1.9
SOX2P48431 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SOX2P48431 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
SOX2P48431 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SOX2P48431 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.19□□□□□ -1.9
SOX2P48431 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
SOX2P48431 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.19□□□□□ -1.9
SOX2P48431 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SOX2P48431 FRG1CP-201ENST00000358464 769 ntBASIC3.19□□□□□ -1.9
SOX2P48431 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SOX2P48431 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.19□□□□□ -1.9
SOX2P48431 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
SOX2P48431 SNORA56-201ENST00000383966 129 ntBASIC3.19□□□□□ -1.9
SOX2P48431 Y_RNA.419-201ENST00000384041 102 ntBASIC3.19□□□□□ -1.9
SOX2P48431 SNORA75B-201ENST00000384053 137 ntBASIC3.19□□□□□ -1.9
SOX2P48431 RNU6-140P-201ENST00000384566 108 ntBASIC3.19□□□□□ -1.9
SOX2P48431 RPS26P8-201ENST00000393490 348 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AL022722.2-201ENST00000402519 180 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AL356057.2-201ENST00000403318 432 ntBASIC3.19□□□□□ -1.9
SOX2P48431 RNU2-3P-201ENST00000410144 191 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.19□□□□□ -1.9
SOX2P48431 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.19□□□□□ -1.9
SOX2P48431 AC092047.1-201ENST00000424997 240 ntBASIC3.19□□□□□ -1.9
SOX2P48431 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.19□□□□□ -1.9
SOX2P48431 SNRPEP9-201ENST00000436794 238 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.19□□□□□ -1.9
SOX2P48431 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.19□□□□□ -1.9
SOX2P48431 MRPS31P2-201ENST00000451581 518 ntBASIC3.19□□□□□ -1.9
SOX2P48431 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.19□□□□□ -1.9
SOX2P48431 AC026801.1-201ENST00000497178 464 ntBASIC3.19□□□□□ -1.9
SOX2P48431 RNU1-61P-201ENST00000516107 151 ntBASIC3.19□□□□□ -1.9
SOX2P48431 CASP1P1-201ENST00000526345 212 ntBASIC3.19□□□□□ -1.9
SOX2P48431 CBX3P7-201ENST00000532876 502 ntBASIC3.19□□□□□ -1.9
SOX2P48431 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.19□□□□□ -1.9
SOX2P48431 SYF2P1-201ENST00000550658 413 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AC026371.1-201ENST00000551867 419 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AC025884.1-201ENST00000556034 378 ntBASIC3.19□□□□□ -1.9
SOX2P48431 MIR4284-201ENST00000578924 81 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AL591034.3-201ENST00000605511 685 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AL133255.1-201ENST00000606374 441 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AL110115.1-201ENST00000614396 364 ntBASIC3.19□□□□□ -1.9
SOX2P48431 RMST_4.1-201ENST00000616886 107 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AC126177.8-201ENST00000618339 1015 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AC099506.2-201ENST00000623074 221 ntBASIC3.19□□□□□ -1.9
SOX2P48431 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.19□□□□□ -1.9
SOX2P48431 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.19□□□□□ -1.9
SOX2P48431 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SOX2P48431 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.19□□□□□ -1.9
SOX2P48431 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SOX2P48431 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SOX2P48431 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.18□□□□□ -1.9
SOX2P48431 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
SOX2P48431 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SOX2P48431 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.18□□□□□ -1.9
SOX2P48431 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SOX2P48431 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SOX2P48431 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SOX2P48431 RPL32P3-201ENST00000359025 275 ntBASIC3.18□□□□□ -1.9
SOX2P48431 RNA5SP42-201ENST00000364278 115 ntBASIC3.18□□□□□ -1.9
SOX2P48431 Y_RNA.259-201ENST00000364619 101 ntBASIC3.18□□□□□ -1.9
SOX2P48431 Y_RNA.324-201ENST00000365165 102 ntBASIC3.18□□□□□ -1.9
SOX2P48431 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SOX2P48431 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SOX2P48431 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX2P48431 MIR591-201ENST00000385290 95 ntBASIC3.18□□□□□ -1.9
SOX2P48431 RN7SKP263-201ENST00000411194 309 ntBASIC3.18□□□□□ -1.9
SOX2P48431 TMEM167AP1-201ENST00000423409 219 ntBASIC3.18□□□□□ -1.9
SOX2P48431 HMGB1P9-201ENST00000429856 646 ntBASIC3.18□□□□□ -1.9
SOX2P48431 MYL8P-204ENST00000431574 518 ntBASIC3.18□□□□□ -1.9
SOX2P48431 FABP5P14-201ENST00000437273 393 ntBASIC3.18□□□□□ -1.9
SOX2P48431 AC007677.1-201ENST00000445757 515 ntBASIC3.18□□□□□ -1.9
SOX2P48431 NDUFB1P2-201ENST00000449477 176 ntBASIC3.18□□□□□ -1.9
SOX2P48431 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX2P48431 HMGN2P16-201ENST00000456802 261 ntBASIC3.18□□□□□ -1.9
SOX2P48431 AC011005.2-201ENST00000487324 359 ntBASIC3.18□□□□□ -1.9
SOX2P48431 RPL21P13-201ENST00000488305 481 ntBASIC3.18□□□□□ -1.9
SOX2P48431 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.18□□□□□ -1.9
SOX2P48431 AC026784.1-201ENST00000507986 352 ntBASIC3.18□□□□□ -1.9
SOX2P48431 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX2P48431 RNU1-86P-201ENST00000516108 154 ntBASIC3.18□□□□□ -1.9
SOX2P48431 RNU1-107P-201ENST00000516617 154 ntBASIC3.18□□□□□ -1.9
SOX2P48431 RNU6-1153P-201ENST00000516760 105 ntBASIC3.18□□□□□ -1.9
SOX2P48431 AC009902.1-201ENST00000519351 183 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms