Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC016907.1-201ENST00000419483 435 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.77□□□□□ -1.97
NEDD4P46934 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.77□□□□□ -1.97
NEDD4P46934 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.77□□□□□ -1.97
NEDD4P46934 AC104850.1-201ENST00000435940 476 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.77□□□□□ -1.97
NEDD4P46934 CR769767.1-201ENST00000436337 346 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 AC018634.1-201ENST00000437554 401 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 MTCO2P7-201ENST00000446518 666 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.77□□□□□ -1.97
NEDD4P46934 RNU6-420P-201ENST00000458780 107 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.77□□□□□ -1.97
NEDD4P46934 RNA5SP402-201ENST00000517148 110 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.77□□□□□ -1.97
NEDD4P46934 MIR3167-201ENST00000579623 85 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 AL133393.1-201ENST00000603277 287 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 AC006566.1-201ENST00000608943 513 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 AC104237.2-201ENST00000612456 443 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 MTND1P37-201ENST00000636562 264 ntBASIC2.77□□□□□ -1.97
NEDD4P46934 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NEDD4P46934 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NEDD4P46934 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.76□□□□□ -1.97
NEDD4P46934 AC073343.1-201ENST00000328239 651 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 RNA5SP126-201ENST00000365092 109 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AL139095.1-201ENST00000404326 391 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 NDUFS5P1-201ENST00000405668 289 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 RNA5SP181-201ENST00000410246 98 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.76□□□□□ -1.97
NEDD4P46934 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.76□□□□□ -1.97
NEDD4P46934 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.76□□□□□ -1.97
NEDD4P46934 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.76□□□□□ -1.97
NEDD4P46934 AC092573.2-201ENST00000434546 243 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 RPS15AP28-201ENST00000435088 386 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NEDD4P46934 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.76□□□□□ -1.97
NEDD4P46934 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.76□□□□□ -1.97
NEDD4P46934 AL160314.1-201ENST00000490836 438 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.76□□□□□ -1.97
NEDD4P46934 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.76□□□□□ -1.97
NEDD4P46934 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.76□□□□□ -1.97
NEDD4P46934 SNORA31.3-201ENST00000516029 96 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 RNU6-1092P-201ENST00000516955 87 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 MTCO2P4-201ENST00000517968 247 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.76□□□□□ -1.97
NEDD4P46934 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.76□□□□□ -1.97
NEDD4P46934 AC022616.3-201ENST00000523940 148 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AP006587.4-201ENST00000526053 529 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 CASP1P1-201ENST00000526345 212 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AP003072.2-201ENST00000527756 676 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 OR5BN1P-201ENST00000532955 829 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 TRAV28-201ENST00000557548 323 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AC012213.3-201ENST00000577199 777 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AC103987.3-201ENST00000582071 292 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 MIR3609-201ENST00000582661 80 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.76□□□□□ -1.97
NEDD4P46934 AC068790.2-201ENST00000602601 557 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AC174048.1-201ENST00000603389 144 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AP002360.4-201ENST00000606980 481 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AL589743.7-201ENST00000612637 233 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 AL160394.1-201ENST00000624765 724 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NEDD4P46934 AL049641.1-201ENST00000441055 1948 ntBASIC2.76□□□□□ -1.97
NEDD4P46934 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NEDD4P46934 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
NEDD4P46934 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NEDD4P46934 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NEDD4P46934 CR848007.1-201ENST00000442354 1699 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 RNU6-169P-201ENST00000365336 107 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 Y_RNA.359-201ENST00000365498 102 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 Y_RNA.436-201ENST00000384097 102 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NEDD4P46934 RNU2-33P-201ENST00000410344 192 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 RNU2-36P-201ENST00000410361 191 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 RNU6-1077P-201ENST00000410506 102 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 MTND3P17-201ENST00000416968 344 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 AC092047.1-201ENST00000424997 240 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.75□□□□□ -1.97
NEDD4P46934 HMGB1P27-201ENST00000431429 603 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.75□□□□□ -1.97
NEDD4P46934 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.75□□□□□ -1.97
NEDD4P46934 HMGB3P12-201ENST00000438745 556 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.75□□□□□ -1.97
NEDD4P46934 MTATP6P30-201ENST00000443540 664 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 SNRPGP6-201ENST00000451124 220 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 KLF3P2-201ENST00000465138 268 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
NEDD4P46934 RPS26P21-201ENST00000475397 348 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 RPL30P14-201ENST00000482744 348 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.75□□□□□ -1.97
NEDD4P46934 TTC39CP1-201ENST00000512513 755 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.75□□□□□ -1.97
NEDD4P46934 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.75□□□□□ -1.97
NEDD4P46934 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.75□□□□□ -1.97
NEDD4P46934 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.75□□□□□ -1.97
NEDD4P46934 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.75□□□□□ -1.97
NEDD4P46934 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.75□□□□□ -1.97
NEDD4P46934 AC087683.1-201ENST00000591187 441 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 AL161729.4-201ENST00000604650 476 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 AC005332.10-201ENST00000612725 619 ntBASIC2.75□□□□□ -1.97
NEDD4P46934 AC034102.8-201ENST00000615146 484 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms