Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MIR561-201ENST00000385216 97 ntBASIC1.24□□□□□ -2.21
RPL28P46779 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RPL28P46779 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.24□□□□□ -2.21
RPL28P46779 RN7SKP223-201ENST00000410582 62 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AC127391.1-201ENST00000411737 98 ntBASIC1.24□□□□□ -2.21
RPL28P46779 OR51A5P-201ENST00000415429 942 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.24□□□□□ -2.21
RPL28P46779 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.24□□□□□ -2.21
RPL28P46779 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL28P46779 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL28P46779 AC005094.1-201ENST00000440420 368 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL28P46779 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL28P46779 FABP5P13-201ENST00000452144 328 ntBASIC1.24□□□□□ -2.21
RPL28P46779 RPL37P6-201ENST00000460682 294 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AC011005.2-201ENST00000487324 359 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AC079203.1-201ENST00000487972 404 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AC055855.1-201ENST00000489563 579 ntBASIC1.24□□□□□ -2.21
RPL28P46779 ANXA2P1-201ENST00000505539 926 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL28P46779 AC008837.2-201ENST00000513076 418 ntBASIC1.24□□□□□ -2.21
RPL28P46779 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.24□□□□□ -2.21
RPL28P46779 ACA59.2-201ENST00000517061 156 ntBASIC1.24□□□□□ -2.21
RPL28P46779 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
RPL28P46779 AC034114.1-201ENST00000520293 285 ntBASIC1.24□□□□□ -2.21
RPL28P46779 LINC00933-203ENST00000559812 219 ntBASIC1.24□□□□□ -2.21
RPL28P46779 MIR5089-201ENST00000580047 84 ntBASIC1.24□□□□□ -2.21
RPL28P46779 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL28P46779 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.24□□□□□ -2.21
RPL28P46779 VN1R83P-201ENST00000595685 445 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AC243960.4-201ENST00000600532 288 ntBASIC1.24□□□□□ -2.21
RPL28P46779 RPL21P136-201ENST00000605378 396 ntBASIC1.24□□□□□ -2.21
RPL28P46779 AC092953.2-201ENST00000608000 699 ntBASIC1.24□□□□□ -2.21
RPL28P46779 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL28P46779 AL512427.1-201ENST00000618593 349 ntBASIC1.24□□□□□ -2.21
RPL28P46779 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.24□□□□□ -2.21
RPL28P46779 PCMTD1P7-201ENST00000634506 357 ntBASIC1.24□□□□□ -2.21
RPL28P46779 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RPL28P46779 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
RPL28P46779 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
RPL28P46779 AP006437.1-201ENST00000641440 3685 ntBASIC1.24□□□□□ -2.21
RPL28P46779 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
RPL28P46779 RNU6-777P-201ENST00000364265 104 ntBASIC1.23□□□□□ -2.21
RPL28P46779 SNORA16.1-201ENST00000364597 132 ntBASIC1.23□□□□□ -2.21
RPL28P46779 RNU6-621P-201ENST00000364752 109 ntBASIC1.23□□□□□ -2.21
RPL28P46779 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RPL28P46779 MIR19A-201ENST00000384878 82 ntBASIC1.23□□□□□ -2.21
RPL28P46779 SNORA40.19-201ENST00000390846 128 ntBASIC1.23□□□□□ -2.21
RPL28P46779 MIR1302-8-201ENST00000408342 128 ntBASIC1.23□□□□□ -2.21
RPL28P46779 VN1R51P-201ENST00000411675 945 ntBASIC1.23□□□□□ -2.21
RPL28P46779 RPS20P15-201ENST00000412792 311 ntBASIC1.23□□□□□ -2.21
RPL28P46779 EIF1AXP1-201ENST00000419267 435 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AC244636.1-201ENST00000421152 228 ntBASIC1.23□□□□□ -2.21
RPL28P46779 PGBD4P6-201ENST00000421501 610 ntBASIC1.23□□□□□ -2.21
RPL28P46779 USP9YP11-201ENST00000427537 717 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AC104651.1-201ENST00000427559 735 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.23□□□□□ -2.21
RPL28P46779 RSU1P2-202ENST00000437884 485 ntBASIC1.23□□□□□ -2.21
RPL28P46779 RPS15AP9-201ENST00000439856 381 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL28P46779 RPL23AP76-201ENST00000441860 458 ntBASIC1.23□□□□□ -2.21
RPL28P46779 BRK1P2-201ENST00000442875 223 ntBASIC1.23□□□□□ -2.21
RPL28P46779 MTND6P13-201ENST00000443510 523 ntBASIC1.23□□□□□ -2.21
RPL28P46779 FAM103A2P-201ENST00000444122 354 ntBASIC1.23□□□□□ -2.21
RPL28P46779 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.23□□□□□ -2.21
RPL28P46779 RPL23AP6-201ENST00000446637 472 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL28P46779 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL28P46779 AC112771.1-201ENST00000463581 102 ntBASIC1.23□□□□□ -2.21
RPL28P46779 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.23□□□□□ -2.21
RPL28P46779 AC034222.1-201ENST00000494052 532 ntBASIC1.23□□□□□ -2.21
RPL28P46779 RPF2P2-201ENST00000504693 896 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AC116655.1-201ENST00000508324 901 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL28P46779 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.23□□□□□ -2.21
RPL28P46779 IGKV3-31-201ENST00000523109 329 ntBASIC1.23□□□□□ -2.21
RPL28P46779 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
RPL28P46779 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.23□□□□□ -2.21
RPL28P46779 NDUFA5P6-201ENST00000542110 379 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.23□□□□□ -2.21
RPL28P46779 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.23□□□□□ -2.21
RPL28P46779 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RPL28P46779 AC068790.3-201ENST00000602988 553 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AC106052.1-201ENST00000608029 497 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AC093673.2-201ENST00000609674 331 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AP000943.4-201ENST00000622912 357 ntBASIC1.23□□□□□ -2.21
RPL28P46779 AC091953.2-201ENST00000623979 160 ntBASIC1.23□□□□□ -2.21
RPL28P46779 MTND5P33-201ENST00000571250 1450 ntBASIC1.23□□□□□ -2.21
RPL28P46779 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RPL28P46779 Y_RNA.110-201ENST00000363220 99 ntBASIC1.22□□□□□ -2.21
RPL28P46779 RNU6-853P-201ENST00000364306 107 ntBASIC1.22□□□□□ -2.21
RPL28P46779 SNORA8-201ENST00000384574 139 ntBASIC1.22□□□□□ -2.21
RPL28P46779 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPL28P46779 AL591034.2-201ENST00000402839 359 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AL356432.1-201ENST00000405809 419 ntBASIC1.22□□□□□ -2.21
RPL28P46779 SNORA3.2-201ENST00000408221 125 ntBASIC1.22□□□□□ -2.21
RPL28P46779 MIR1284-201ENST00000408337 120 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AL139156.1-201ENST00000412785 841 ntBASIC1.22□□□□□ -2.21
RPL28P46779 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms