Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RN7SKP280-201ENST00000364196 304 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 RNU6-38P-201ENST00000384085 107 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
NKX2-1P43699 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-1P43699 BPY2DP-201ENST00000422208 265 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AL158156.1-201ENST00000422509 473 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-1P43699 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-1P43699 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-1P43699 AL139415.2-201ENST00000431968 163 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-1P43699 RNU6-333P-201ENST00000459117 107 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC006512.1-201ENST00000468816 291 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC128713.1-201ENST00000471495 306 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.7□□□□□ -1.98
NKX2-1P43699 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-1P43699 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-1P43699 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX2-1P43699 AC079140.5-201ENST00000507882 310 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC074344.1-201ENST00000512823 224 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 RNA5SP401-201ENST00000515920 127 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 RNU1-103P-201ENST00000516502 125 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC022634.1-201ENST00000520765 532 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 HIF1AP1-201ENST00000553642 175 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AL133241.1-201ENST00000556832 487 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AL157871.3-201ENST00000557231 293 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-1P43699 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-1P43699 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-1P43699 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-1P43699 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-1P43699 MIR7851-201ENST00000610611 160 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 uc_338.1-201ENST00000612113 180 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AL020991.1-201ENST00000612314 373 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX2-1P43699 AC024614.3-201ENST00000637860 256 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC099654.14-201ENST00000638599 341 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 AC119674.1-207ENST00000641355 633 ntBASIC2.7□□□□□ -1.98
NKX2-1P43699 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
NKX2-1P43699 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-1P43699 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.7□□□□□ -1.98
NKX2-1P43699 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX2-1P43699 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-1P43699 AC121333.1-201ENST00000567488 2709 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 RNU6-1287P-201ENST00000362914 107 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 CD24P4-201ENST00000382840 243 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 RNU6-1060P-201ENST00000384664 107 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 SNORA46-201ENST00000384762 135 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NKX2-1P43699 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NKX2-1P43699 AL591416.1-201ENST00000404015 867 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AL445189.1-201ENST00000405722 338 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 MIR1193-201ENST00000408109 78 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 ATP5A1P2-201ENST00000412323 255 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC092809.3-201ENST00000415453 231 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC245054.2-201ENST00000415639 319 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-1P43699 RPL7P10-201ENST00000417407 739 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 MTCYBP8-201ENST00000422855 651 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-1P43699 AL160275.3-201ENST00000423876 471 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 SKA2P1-201ENST00000425592 390 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC098614.2-201ENST00000426040 255 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX2-1P43699 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-1P43699 AC244505.4-201ENST00000434905 287 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC009969.1-201ENST00000438726 172 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 SSXP5-201ENST00000443473 287 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC104058.1-201ENST00000448028 297 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 NDUFB1P2-201ENST00000449477 176 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 UQCRHP3-201ENST00000451503 251 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-1P43699 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-1P43699 SNRPFP3-201ENST00000457792 225 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 RPS29P15-201ENST00000458329 171 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 SNORD105B-201ENST00000458770 79 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 TRBV1-201ENST00000476502 284 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC092989.1-201ENST00000481235 277 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 RPL21P13-201ENST00000488305 481 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.69□□□□□ -1.98
NKX2-1P43699 EIF4EP3-201ENST00000498782 656 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-1P43699 SUMO2P6-201ENST00000505273 288 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 RBBP4P6-201ENST00000508098 202 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX2-1P43699 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.69□□□□□ -1.98
NKX2-1P43699 RNU6-123P-201ENST00000516163 102 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-1P43699 BNIP3P6-201ENST00000549284 499 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-1P43699 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-1P43699 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.69□□□□□ -1.98
NKX2-1P43699 AC060780.3-201ENST00000589464 80 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC006504.8-201ENST00000621046 635 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 AC091903.1-201ENST00000624322 454 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 MTND4P14-201ENST00000435799 1354 ntBASIC2.69□□□□□ -1.98
NKX2-1P43699 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-1P43699 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms