Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AP003476.1-201ENST00000623984 516 ntBASIC0.32□□□□□ -2.36
HTTP42858 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
HTTP42858 RNA5SP98-201ENST00000363158 137 ntBASIC0.31□□□□□ -2.36
HTTP42858 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
HTTP42858 AP002784.2-201ENST00000397300 549 ntBASIC0.31□□□□□ -2.36
HTTP42858 AC138853.1-201ENST00000503549 823 ntBASIC0.31□□□□□ -2.36
HTTP42858 CYCTP-201ENST00000504253 315 ntBASIC0.31□□□□□ -2.36
HTTP42858 UBL5P1-201ENST00000507979 193 ntBASIC0.31□□□□□ -2.36
HTTP42858 RNU6-322P-201ENST00000516010 103 ntBASIC0.31□□□□□ -2.36
HTTP42858 AL590705.4-201ENST00000532209 134 ntBASIC0.31□□□□□ -2.36
HTTP42858 Pinc.1-201ENST00000616452 154 ntBASIC0.31□□□□□ -2.36
HTTP42858 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.31□□□□□ -2.36
HTTP42858 AP001350.1-201ENST00000601906 1524 ntBASIC0.31□□□□□ -2.36
HTTP42858 MIR10B-201ENST00000385011 110 ntBASIC0.31□□□□□ -2.36
HTTP42858 RNU6-1077P-201ENST00000410506 102 ntBASIC0.31□□□□□ -2.36
HTTP42858 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.31□□□□□ -2.36
HTTP42858 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.31□□□□□ -2.36
HTTP42858 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
HTTP42858 AC087884.1-201ENST00000469738 328 ntBASIC0.31□□□□□ -2.36
HTTP42858 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.31□□□□□ -2.36
HTTP42858 EIF4EP5-201ENST00000528228 640 ntBASIC0.31□□□□□ -2.36
HTTP42858 AL669831.4-202ENST00000590817 238 ntBASIC0.31□□□□□ -2.36
HTTP42858 MIR126-201ENST00000362291 85 ntBASIC0.31□□□□□ -2.36
HTTP42858 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.31□□□□□ -2.36
HTTP42858 DYNLT3P2-201ENST00000442517 295 ntBASIC0.31□□□□□ -2.36
HTTP42858 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
HTTP42858 AC145207.9-201ENST00000623802 325 ntBASIC0.31□□□□□ -2.36
HTTP42858 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
HTTP42858 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.3□□□□□ -2.36
HTTP42858 AL356131.1-201ENST00000405826 414 ntBASIC0.3□□□□□ -2.36
HTTP42858 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
HTTP42858 AC097499.1-201ENST00000444277 208 ntBASIC0.3□□□□□ -2.36
HTTP42858 AL157398.1-201ENST00000452981 186 ntBASIC0.3□□□□□ -2.36
HTTP42858 AC008834.1-201ENST00000511612 175 ntBASIC0.3□□□□□ -2.36
HTTP42858 RNU2-19P-201ENST00000517288 84 ntBASIC0.3□□□□□ -2.36
HTTP42858 AC067838.1-201ENST00000606064 577 ntBASIC0.3□□□□□ -2.36
HTTP42858 AL627230.6-201ENST00000611129 280 ntBASIC0.3□□□□□ -2.36
HTTP42858 AC110792.3-201ENST00000595906 1614 ntBASIC0.3□□□□□ -2.36
HTTP42858 RNU6-1126P-201ENST00000384002 107 ntBASIC0.3□□□□□ -2.36
HTTP42858 SNORA50A-201ENST00000384225 134 ntBASIC0.3□□□□□ -2.36
HTTP42858 MIR147B-201ENST00000390185 80 ntBASIC0.3□□□□□ -2.36
HTTP42858 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.3□□□□□ -2.36
HTTP42858 AL353898.1-201ENST00000444055 238 ntBASIC0.3□□□□□ -2.36
HTTP42858 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.3□□□□□ -2.36
HTTP42858 RNU6-1218P-201ENST00000458990 108 ntBASIC0.3□□□□□ -2.36
HTTP42858 AC087477.1-201ENST00000465747 340 ntBASIC0.3□□□□□ -2.36
HTTP42858 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.3□□□□□ -2.36
HTTP42858 AC134050.1-201ENST00000495088 933 ntBASIC0.3□□□□□ -2.36
HTTP42858 AC005668.1-201ENST00000571142 476 ntBASIC0.3□□□□□ -2.36
HTTP42858 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.3□□□□□ -2.36
HTTP42858 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.3□□□□□ -2.36
HTTP42858 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.3□□□□□ -2.36
HTTP42858 RNA5SP361-201ENST00000362686 118 ntBASIC0.29□□□□□ -2.36
HTTP42858 SNORA3A-201ENST00000364113 130 ntBASIC0.29□□□□□ -2.36
HTTP42858 RPS4XP3-201ENST00000398541 413 ntBASIC0.29□□□□□ -2.36
HTTP42858 TRGV6-201ENST00000417928 299 ntBASIC0.29□□□□□ -2.36
HTTP42858 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.29□□□□□ -2.36
HTTP42858 AC015908.1-201ENST00000478739 476 ntBASIC0.29□□□□□ -2.36
HTTP42858 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.29□□□□□ -2.36
HTTP42858 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.29□□□□□ -2.36
HTTP42858 FAM60BP-201ENST00000578364 658 ntBASIC0.29□□□□□ -2.36
HTTP42858 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.29□□□□□ -2.36
HTTP42858 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.29□□□□□ -2.36
HTTP42858 AL606490.4-201ENST00000423117 127 ntBASIC0.29□□□□□ -2.36
HTTP42858 RSU1P2-202ENST00000437884 485 ntBASIC0.29□□□□□ -2.36
HTTP42858 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.29□□□□□ -2.36
HTTP42858 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.29□□□□□ -2.36
HTTP42858 AC136628.3-201ENST00000521868 290 ntBASIC0.29□□□□□ -2.36
HTTP42858 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.29□□□□□ -2.36
HTTP42858 MTCYBP41-201ENST00000528913 1123 ntBASIC0.29□□□□□ -2.36
HTTP42858 RPS3AP24-201ENST00000407896 734 ntBASIC0.29□□□□□ -2.36
HTTP42858 RNU6-920P-201ENST00000410926 92 ntBASIC0.29□□□□□ -2.36
HTTP42858 SNX3P1X-201ENST00000414887 175 ntBASIC0.29□□□□□ -2.36
HTTP42858 AL035410.1-201ENST00000427409 427 ntBASIC0.29□□□□□ -2.36
HTTP42858 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.29□□□□□ -2.36
HTTP42858 RNA5SP57-201ENST00000459463 123 ntBASIC0.29□□□□□ -2.36
HTTP42858 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.29□□□□□ -2.36
HTTP42858 AC019288.1-201ENST00000557918 224 ntBASIC0.29□□□□□ -2.36
HTTP42858 PRR13P7-201ENST00000605538 430 ntBASIC0.29□□□□□ -2.36
HTTP42858 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.28□□□□□ -2.36
HTTP42858 OR2A41P-201ENST00000473586 105 ntBASIC0.28□□□□□ -2.36
HTTP42858 AC108157.1-201ENST00000510511 539 ntBASIC0.28□□□□□ -2.36
HTTP42858 MTCO2P22-201ENST00000603246 681 ntBASIC0.28□□□□□ -2.36
HTTP42858 SNORA25.8-201ENST00000364831 128 ntBASIC0.28□□□□□ -2.37
HTTP42858 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.28□□□□□ -2.37
HTTP42858 MTCO3P4-201ENST00000419236 787 ntBASIC0.28□□□□□ -2.37
HTTP42858 AC067940.1-201ENST00000458411 300 ntBASIC0.28□□□□□ -2.37
HTTP42858 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.28□□□□□ -2.37
HTTP42858 AC079140.2-201ENST00000506193 142 ntBASIC0.28□□□□□ -2.37
HTTP42858 AC007038.2-201ENST00000608095 740 ntBASIC0.28□□□□□ -2.37
HTTP42858 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.37
HTTP42858 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.28□□□□□ -2.37
HTTP42858 MIR607-201ENST00000385241 96 ntBASIC0.27□□□□□ -2.37
HTTP42858 MIR934-201ENST00000401241 83 ntBASIC0.27□□□□□ -2.37
HTTP42858 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.27□□□□□ -2.37
HTTP42858 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.27□□□□□ -2.37
HTTP42858 RNU6-1073P-201ENST00000517182 106 ntBASIC0.27□□□□□ -2.37
HTTP42858 MIR5571-201ENST00000577998 113 ntBASIC0.27□□□□□ -2.37
HTTP42858 AC010329.5-201ENST00000623497 2174 ntBASIC0.27□□□□□ -2.37
HTTP42858 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms