Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RNA5SP213-201ENST00000391031 106 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN1P35523 AL645733.1-201ENST00000402250 217 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCN1P35523 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCN1P35523 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCN1P35523 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCN1P35523 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCN1P35523 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCN1P35523 AL031659.1-201ENST00000447075 539 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.6□□□□□ -1.51
CLCN1P35523 SSXP4-201ENST00000451349 245 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 AC093270.2-201ENST00000486157 792 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 AL136038.1-201ENST00000497246 351 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 AC091874.1-201ENST00000511402 339 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCN1P35523 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCN1P35523 CYCSP39-201ENST00000565821 309 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCN1P35523 MIR4282-201ENST00000583613 67 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 AC011921.3-201ENST00000605540 361 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.6□□□□□ -1.51
CLCN1P35523 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN1P35523 IGHVIII-44-202ENST00000636235 289 ntBASIC5.6□□□□□ -1.51
CLCN1P35523 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCN1P35523 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN1P35523 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN1P35523 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN1P35523 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN1P35523 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN1P35523 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLCN1P35523 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.6□□□□□ -1.51
CLCN1P35523 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCN1P35523 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCN1P35523 AC135776.4-201ENST00000624300 1904 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 Y_RNA.8-201ENST00000362353 102 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 RNU6-626P-201ENST00000363354 107 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 RNA5SP90-201ENST00000364801 99 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 Y_RNA.383-201ENST00000383855 97 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 RNU6-804P-201ENST00000384286 107 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 RNA5SP104-201ENST00000410989 118 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 BX510359.3-201ENST00000422168 306 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 AC243964.1-201ENST00000441814 261 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCN1P35523 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCN1P35523 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCN1P35523 RPS26P28-201ENST00000470806 348 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 AC091959.1-201ENST00000495857 238 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCN1P35523 RNU6-1183P-201ENST00000517054 60 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCN1P35523 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCN1P35523 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCN1P35523 LINC00933-203ENST00000559812 219 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.59□□□□□ -1.51
CLCN1P35523 MIR6730-201ENST00000622213 67 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCN1P35523 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCN1P35523 AC074101.1-201ENST00000637861 241 ntBASIC5.59□□□□□ -1.51
CLCN1P35523 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCN1P35523 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCN1P35523 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCN1P35523 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.59□□□□□ -1.51
CLCN1P35523 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.59□□□□□ -1.51
CLCN1P35523 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLCN1P35523 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.59□□□□□ -1.52
CLCN1P35523 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLCN1P35523 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CLCN1P35523 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLCN1P35523 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
CLCN1P35523 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.58□□□□□ -1.52
CLCN1P35523 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN1P35523 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLCN1P35523 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN1P35523 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLCN1P35523 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCN1P35523 U3.3-201ENST00000362986 216 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 Y_RNA.82-201ENST00000363000 102 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 Y_RNA.92-201ENST00000363043 102 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 Y_RNA.235-201ENST00000364412 102 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 RNU6-923P-201ENST00000364753 107 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 Y_RNA.306-201ENST00000365015 102 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 Y_RNA.312-201ENST00000365089 102 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 Y_RNA.322-201ENST00000365151 102 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 RNU6-142P-201ENST00000384019 107 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 SNORA29-201ENST00000384183 140 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 RNU6-1081P-201ENST00000384537 107 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 MIR143-201ENST00000385300 106 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 MIR937-201ENST00000401271 86 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLCN1P35523 AL391361.1-201ENST00000405580 489 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 RNA5SP39-201ENST00000411245 120 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 AL451074.5-201ENST00000415894 435 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 AL390729.2-201ENST00000416137 156 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 WARS2P1-201ENST00000429678 537 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 COX6B1P7-201ENST00000430845 235 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 AL353748.1-201ENST00000440753 474 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 AC011753.3-201ENST00000443436 406 ntBASIC5.58□□□□□ -1.52
CLCN1P35523 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.58□□□□□ -1.52
CLCN1P35523 Y_RNA.650-201ENST00000459002 102 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms