Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 Y_RNA.689-201ENST00000516589 107 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 RNU6-410P-201ENST00000517006 107 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 MTCO2P4-201ENST00000517968 247 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXA13P31271 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXA13P31271 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.16□□□□□ -1.9
HOXA13P31271 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXA13P31271 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXA13P31271 AC068135.2-201ENST00000569293 1028 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 ZNF861P-201ENST00000588126 639 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AC136601.2-201ENST00000604356 474 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AC004805.2-201ENST00000605382 482 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 SEPT14P19-203ENST00000633205 211 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
HOXA13P31271 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXA13P31271 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXA13P31271 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
HOXA13P31271 AC233263.6-201ENST00000631132 1963 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 OR4G2P-201ENST00000328113 903 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 RNU6-270P-201ENST00000364131 105 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 RNU6-1283P-201ENST00000365314 105 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
HOXA13P31271 Y_RNA.500-201ENST00000384466 111 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 RNU6-14P-201ENST00000384630 106 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HOXA13P31271 RNU6-817P-201ENST00000391083 104 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 CALM2P3-201ENST00000400429 449 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AL139397.2-201ENST00000404529 772 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 RPS12P24-201ENST00000412619 387 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.15□□□□□ -1.91
HOXA13P31271 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXA13P31271 AC092809.3-201ENST00000415453 231 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 MTND3P17-201ENST00000416968 344 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 HSPE1P1-201ENST00000421494 318 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXA13P31271 NUP35P1-201ENST00000422734 947 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXA13P31271 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXA13P31271 AL592045.1-201ENST00000429867 352 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXA13P31271 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXA13P31271 MTND1P1-201ENST00000445453 368 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXA13P31271 AC079781.2-201ENST00000446424 169 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AL109933.2-201ENST00000452651 260 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 C1DP4-201ENST00000455429 424 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AC104472.2-201ENST00000469035 601 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXA13P31271 AC006483.1-201ENST00000487308 313 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXA13P31271 AC010265.1-201ENST00000513509 211 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 SNORA31.3-201ENST00000516029 96 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 RNA5SP165-201ENST00000517142 115 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXA13P31271 AMZ2P1-203ENST00000565833 850 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 RPL12P50-201ENST00000603116 116 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AL121992.2-201ENST00000606262 256 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AC090115.4-201ENST00000609970 188 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AL365204.3-201ENST00000612448 685 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXA13P31271 AC090517.2-201ENST00000614966 680 ntBASIC3.15□□□□□ -1.91
HOXA13P31271 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXA13P31271 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXA13P31271 AL137003.2-201ENST00000606924 2538 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 RNU6-181P-201ENST00000363225 107 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 RNU6-217P-201ENST00000384164 104 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AL031121.1-201ENST00000406553 254 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 RNU2-68P-201ENST00000410878 191 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 RNA5SP184-201ENST00000411071 108 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 MTND1P23-201ENST00000416931 372 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 ELOCP14-201ENST00000428070 331 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXA13P31271 MTATP6P13-201ENST00000438531 667 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXA13P31271 ELOCP7-201ENST00000439968 331 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXA13P31271 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXA13P31271 AC092798.1-201ENST00000458542 409 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 RPL39P36-201ENST00000490784 156 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AC023194.1-201ENST00000493084 308 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AC108078.2-201ENST00000510750 236 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 RPL23AP94-201ENST00000512518 302 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXA13P31271 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXA13P31271 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 RNU6-445P-201ENST00000516949 107 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXA13P31271 AC090572.1-201ENST00000519251 160 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AK6P1-201ENST00000540219 478 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXA13P31271 SUB1P2-201ENST00000556401 297 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXA13P31271 MTND4LP5-201ENST00000605152 292 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AC022893.3-201ENST00000607665 437 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AL158209.2-201ENST00000619266 216 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 AL512643.1-201ENST00000635735 524 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 MTND5P42-201ENST00000637720 498 ntBASIC3.14□□□□□ -1.91
HOXA13P31271 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HOXA13P31271 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXA13P31271 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms