Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 FAM206BP-201ENST00000510179 541 ntBASIC3.89□□□□□ -1.79
SMARCA1P28370 RNU4-49P-201ENST00000516080 140 ntBASIC3.89□□□□□ -1.79
SMARCA1P28370 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCA1P28370 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.89□□□□□ -1.79
SMARCA1P28370 AL138889.2-201ENST00000603883 242 ntBASIC3.89□□□□□ -1.79
SMARCA1P28370 DUSP12P1-201ENST00000612874 516 ntBASIC3.89□□□□□ -1.79
SMARCA1P28370 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SMARCA1P28370 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.89□□□□□ -1.79
SMARCA1P28370 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.89□□□□□ -1.79
SMARCA1P28370 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SMARCA1P28370 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SMARCA1P28370 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMARCA1P28370 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
SMARCA1P28370 CUL1P1-201ENST00000509510 2425 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMARCA1P28370 Y_RNA.61-201ENST00000362835 102 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 Y_RNA.166-201ENST00000363730 102 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 U3.12-201ENST00000364498 214 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 SNORA70.4-201ENST00000365509 134 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 AL356432.1-201ENST00000405809 419 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 NDUFB4P5-201ENST00000415445 361 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 Z85995.1-201ENST00000415547 335 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 AL160275.3-201ENST00000423876 471 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 RPL23AP82-202ENST00000427528 469 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 HMGB1P27-201ENST00000431429 603 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 SNRPEP4-201ENST00000435815 279 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 TAAR7P-201ENST00000436141 242 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 PRPS1P1-201ENST00000445305 876 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 SSXP4-201ENST00000451349 245 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.88□□□□□ -1.79
SMARCA1P28370 AMD1P1-201ENST00000457220 922 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 CENPBD1P1-201ENST00000464061 469 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 AC009901.1-201ENST00000506703 541 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 AC010265.1-201ENST00000513509 211 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 APOOP4-201ENST00000513530 597 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 RNU6-1256P-201ENST00000516539 103 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 RNU7-30P-201ENST00000516835 62 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.88□□□□□ -1.79
SMARCA1P28370 AC107934.2-201ENST00000518653 310 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCA1P28370 AC011611.1-201ENST00000552179 197 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 OR11H5P-201ENST00000554039 926 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.88□□□□□ -1.79
SMARCA1P28370 RPS3AP23-202ENST00000574601 686 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 MIR4425-201ENST00000580572 84 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCA1P28370 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.88□□□□□ -1.79
SMARCA1P28370 AC002545.1-201ENST00000592511 181 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 BNIP3P25-201ENST00000596023 559 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 SRGNP1-201ENST00000603392 451 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 CTHRC1P1-201ENST00000605383 469 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCA1P28370 AC009570.1-201ENST00000609599 745 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 SNORD39.4-201ENST00000620099 78 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 AP003400.5-201ENST00000624827 617 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.88□□□□□ -1.79
SMARCA1P28370 AC073544.1-201ENST00000600110 1595 ntBASIC3.88□□□□□ -1.79
SMARCA1P28370 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SMARCA1P28370 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCA1P28370 AL079305.1-201ENST00000623159 3008 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.87□□□□□ -1.79
SMARCA1P28370 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.87□□□□□ -1.79
SMARCA1P28370 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCA1P28370 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.87□□□□□ -1.79
SMARCA1P28370 UBE2L2-201ENST00000254302 429 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCA1P28370 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMARCA1P28370 MIR208A-201ENST00000362287 71 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 RNU6-512P-201ENST00000364438 103 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 RNU6-715P-201ENST00000365204 103 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 Y_RNA.529-201ENST00000384586 119 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 Y_RNA.534-201ENST00000384599 112 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 SNORA16.2-201ENST00000390991 127 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 SNORD70.1-201ENST00000391007 85 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCA1P28370 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCA1P28370 AC126124.2-201ENST00000413542 321 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 BTF3L4P3-201ENST00000418879 476 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AL158156.1-201ENST00000422509 473 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AL669831.1-202ENST00000428504 417 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AL590383.1-201ENST00000428602 75 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 IFNA20P-201ENST00000436840 528 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 GTF2IP13-201ENST00000438487 386 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 HMGB3P11-201ENST00000440127 604 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AC093019.1-201ENST00000443135 252 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 RPL21P10-201ENST00000463521 490 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AC004801.2-202ENST00000463559 283 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 RPL32P34-201ENST00000486380 400 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCA1P28370 RNU6-914P-201ENST00000516749 109 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCA1P28370 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.87□□□□□ -1.79
SMARCA1P28370 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.87□□□□□ -1.79
SMARCA1P28370 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.87□□□□□ -1.79
SMARCA1P28370 AL163153.1-201ENST00000554223 283 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AC005476.1-201ENST00000554427 397 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 SCOCP1-201ENST00000554676 349 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 VN1R80P-201ENST00000597126 338 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AC013553.2-201ENST00000604244 589 ntBASIC3.87□□□□□ -1.79
SMARCA1P28370 AC073657.2-201ENST00000605661 303 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms