Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.7□□□□□ -1.82
CD40P25942 NDUFS5P4-201ENST00000412983 318 ntBASIC3.7□□□□□ -1.82
CD40P25942 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.7□□□□□ -1.82
CD40P25942 AC113618.1-201ENST00000416747 285 ntBASIC3.7□□□□□ -1.82
CD40P25942 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.7□□□□□ -1.82
CD40P25942 AC008267.5-201ENST00000424928 265 ntBASIC3.7□□□□□ -1.82
CD40P25942 MTND3P9-201ENST00000429526 346 ntBASIC3.7□□□□□ -1.82
CD40P25942 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.7□□□□□ -1.82
CD40P25942 GSTA11P-201ENST00000452866 669 ntBASIC3.7□□□□□ -1.82
CD40P25942 AC128713.1-201ENST00000471495 306 ntBASIC3.7□□□□□ -1.82
CD40P25942 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CD40P25942 DEFB109F-201ENST00000491870 277 ntBASIC3.7□□□□□ -1.82
CD40P25942 RPS27AP10-201ENST00000496103 208 ntBASIC3.7□□□□□ -1.82
CD40P25942 AC022447.4-201ENST00000504053 364 ntBASIC3.7□□□□□ -1.82
CD40P25942 RNU6-612P-201ENST00000516909 102 ntBASIC3.7□□□□□ -1.82
CD40P25942 AP005902.1-201ENST00000521358 186 ntBASIC3.7□□□□□ -1.82
CD40P25942 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.7□□□□□ -1.82
CD40P25942 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
CD40P25942 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.7□□□□□ -1.82
CD40P25942 DNAJC8P1-201ENST00000554535 372 ntBASIC3.7□□□□□ -1.82
CD40P25942 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.7□□□□□ -1.82
CD40P25942 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40P25942 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.7□□□□□ -1.82
CD40P25942 MIR6076-201ENST00000617521 113 ntBASIC3.7□□□□□ -1.82
CD40P25942 AC140113.4-201ENST00000622087 222 ntBASIC3.7□□□□□ -1.82
CD40P25942 AC005086.4-201ENST00000623065 213 ntBASIC3.7□□□□□ -1.82
CD40P25942 MIR492-201ENST00000638676 116 ntBASIC3.7□□□□□ -1.82
CD40P25942 AC007656.2-201ENST00000624902 4547 ntBASIC3.7□□□□□ -1.82
CD40P25942 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40P25942 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40P25942 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.69□□□□□ -1.82
CD40P25942 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CD40P25942 AL133243.3-201ENST00000617415 3004 ntBASIC3.69□□□□□ -1.82
CD40P25942 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40P25942 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CD40P25942 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CD40P25942 Y_RNA.364-201ENST00000365532 101 ntBASIC3.69□□□□□ -1.82
CD40P25942 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CD40P25942 RNU6-1032P-201ENST00000384100 107 ntBASIC3.69□□□□□ -1.82
CD40P25942 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CD40P25942 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CD40P25942 RNU4-6P-201ENST00000410804 122 ntBASIC3.69□□□□□ -1.82
CD40P25942 MRPS18CP6-201ENST00000423587 223 ntBASIC3.69□□□□□ -1.82
CD40P25942 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.69□□□□□ -1.82
CD40P25942 COX6B1P7-201ENST00000430845 235 ntBASIC3.69□□□□□ -1.82
CD40P25942 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.69□□□□□ -1.82
CD40P25942 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.69□□□□□ -1.82
CD40P25942 AL590664.1-201ENST00000448065 339 ntBASIC3.69□□□□□ -1.82
CD40P25942 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.69□□□□□ -1.82
CD40P25942 RN7SL41P-201ENST00000476144 297 ntBASIC3.69□□□□□ -1.82
CD40P25942 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CD40P25942 RPL30P14-201ENST00000482744 348 ntBASIC3.69□□□□□ -1.82
CD40P25942 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.69□□□□□ -1.82
CD40P25942 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.69□□□□□ -1.82
CD40P25942 SNORA43.2-201ENST00000516652 128 ntBASIC3.69□□□□□ -1.82
CD40P25942 SNORD116.3-201ENST00000517176 78 ntBASIC3.69□□□□□ -1.82
CD40P25942 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.69□□□□□ -1.82
CD40P25942 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40P25942 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.69□□□□□ -1.82
CD40P25942 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.69□□□□□ -1.82
CD40P25942 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.69□□□□□ -1.82
CD40P25942 AL391261.3-201ENST00000557194 520 ntBASIC3.69□□□□□ -1.82
CD40P25942 AC005046.1-201ENST00000608515 625 ntBASIC3.69□□□□□ -1.82
CD40P25942 MIR8076-201ENST00000611401 83 ntBASIC3.69□□□□□ -1.82
CD40P25942 ZYXP1-201ENST00000617638 118 ntBASIC3.69□□□□□ -1.82
CD40P25942 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.69□□□□□ -1.82
CD40P25942 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40P25942 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.69□□□□□ -1.82
CD40P25942 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40P25942 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40P25942 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.69□□□□□ -1.82
CD40P25942 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CD40P25942 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
CD40P25942 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CD40P25942 AC083843.3-201ENST00000623679 2186 ntBASIC3.68□□□□□ -1.82
CD40P25942 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.68□□□□□ -1.82
CD40P25942 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CD40P25942 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CD40P25942 RNU1-20P-201ENST00000363314 162 ntBASIC3.68□□□□□ -1.82
CD40P25942 RNA5SP28-201ENST00000363841 119 ntBASIC3.68□□□□□ -1.82
CD40P25942 RNA5SP22-201ENST00000365393 109 ntBASIC3.68□□□□□ -1.82
CD40P25942 Y_RNA.533-201ENST00000384596 114 ntBASIC3.68□□□□□ -1.82
CD40P25942 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.68□□□□□ -1.82
CD40P25942 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.68□□□□□ -1.82
CD40P25942 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.68□□□□□ -1.82
CD40P25942 AL358472.1-201ENST00000431295 329 ntBASIC3.68□□□□□ -1.82
CD40P25942 SNORA71B-202ENST00000439232 272 ntBASIC3.68□□□□□ -1.82
CD40P25942 snoU13.28-201ENST00000459235 104 ntBASIC3.68□□□□□ -1.82
CD40P25942 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.68□□□□□ -1.82
CD40P25942 RPL23AP49-201ENST00000492925 468 ntBASIC3.68□□□□□ -1.82
CD40P25942 AC099522.1-202ENST00000514718 367 ntBASIC3.68□□□□□ -1.82
CD40P25942 SNORA25.10-201ENST00000515926 124 ntBASIC3.68□□□□□ -1.82
CD40P25942 RNA5SP360-201ENST00000516555 118 ntBASIC3.68□□□□□ -1.82
CD40P25942 RNU6-1137P-201ENST00000517073 99 ntBASIC3.68□□□□□ -1.82
CD40P25942 AC010186.2-204ENST00000537668 439 ntBASIC3.68□□□□□ -1.82
CD40P25942 AC006064.5-201ENST00000541782 248 ntBASIC3.68□□□□□ -1.82
CD40P25942 OR8R1P-201ENST00000543943 764 ntBASIC3.68□□□□□ -1.82
CD40P25942 AC107016.1-201ENST00000550463 337 ntBASIC3.68□□□□□ -1.82
CD40P25942 MIR3160-1-201ENST00000577972 85 ntBASIC3.68□□□□□ -1.82
CD40P25942 AL591034.3-201ENST00000605511 685 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms