Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 Y_RNA.598-201ENST00000410480 95 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 Y_RNA.619-201ENST00000410951 90 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AL663109.1-201ENST00000411498 844 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.77□□□□□ -2.13
COL5A1P20908 MTCO3P41-201ENST00000414801 328 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 MTCO1P21-201ENST00000416634 589 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 MTCYBP45-201ENST00000435243 565 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 RPL37P21-201ENST00000435890 276 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 SNRPEP7-201ENST00000438350 220 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.77□□□□□ -2.13
COL5A1P20908 RPL17P49-201ENST00000443728 411 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 EPS15P1-201ENST00000448836 336 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A1P20908 SUMO2P2-201ENST00000456482 255 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC104685.1-201ENST00000502445 371 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A1P20908 AC093767.1-201ENST00000504523 156 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A1P20908 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A1P20908 RNU1-61P-201ENST00000516107 151 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A1P20908 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
COL5A1P20908 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A1P20908 MIR5697-201ENST00000578045 78 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A1P20908 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A1P20908 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A1P20908 Z82209.1-201ENST00000422141 2135 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
COL5A1P20908 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A1P20908 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A1P20908 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
COL5A1P20908 RNU6-501P-201ENST00000364072 100 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 Y_RNA.517-201ENST00000384551 106 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 MIR649-201ENST00000384843 97 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
COL5A1P20908 HMGB1P17-201ENST00000403495 628 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 MIR320C1-201ENST00000408566 88 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.77□□□□□ -2.13
COL5A1P20908 RN7SKP142-201ENST00000411236 328 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 RPS27AP14-201ENST00000422868 454 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 RPS25P9-201ENST00000435591 252 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.77□□□□□ -2.13
COL5A1P20908 USP9YP29-201ENST00000445112 563 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 ARPC3P5-201ENST00000448802 534 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AL353691.1-201ENST00000451332 387 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 RPL23AP35-201ENST00000451906 501 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.77□□□□□ -2.13
COL5A1P20908 AC080013.2-201ENST00000460866 323 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A1P20908 AC104564.1-201ENST00000493028 407 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC138853.1-201ENST00000503549 823 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 SNORA48.10-201ENST00000516965 160 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.77□□□□□ -2.13
COL5A1P20908 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.77□□□□□ -2.13
COL5A1P20908 CYCSP2-201ENST00000558168 301 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL5A1P20908 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.77□□□□□ -2.13
COL5A1P20908 MTATP6P3-201ENST00000581686 676 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 MTCYBP22-201ENST00000603788 447 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC112187.2-201ENST00000604345 283 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC098614.4-201ENST00000607601 462 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AL590099.1-201ENST00000615276 138 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 MIR6864-201ENST00000617935 70 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC004009.2-201ENST00000623016 728 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.77□□□□□ -2.13
COL5A1P20908 AC002546.1-201ENST00000588041 2504 ntBASIC1.77□□□□□ -2.13
COL5A1P20908 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
COL5A1P20908 Y_RNA.505-201ENST00000384489 102 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 RNU6-441P-201ENST00000384545 106 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 RN7SKP266-201ENST00000410232 287 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.76□□□□□ -2.13
COL5A1P20908 AC004965.1-201ENST00000413033 213 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 EIF1AXP1-201ENST00000419267 435 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 HSPE1P1-201ENST00000421494 318 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A1P20908 LSM1P1-201ENST00000438629 273 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 MTND5P14-201ENST00000441481 1267 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A1P20908 MTCO1P27-201ENST00000448269 226 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 GAPDHP17-201ENST00000449858 1001 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.76□□□□□ -2.13
COL5A1P20908 AL137159.1-201ENST00000452808 512 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 HMGN2P16-201ENST00000456802 261 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 RPS29P12-201ENST00000460178 152 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 PABPC1P3-201ENST00000469174 459 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A1P20908 RNU6-405P-201ENST00000516637 110 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 COX6CP5-201ENST00000527162 228 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.76□□□□□ -2.13
COL5A1P20908 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.76□□□□□ -2.13
COL5A1P20908 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A1P20908 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A1P20908 AGGF1P4-201ENST00000568249 801 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 MYL12BP1-201ENST00000569826 507 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A1P20908 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.76□□□□□ -2.13
COL5A1P20908 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.76□□□□□ -2.13
COL5A1P20908 AC087752.4-201ENST00000605911 462 ntBASIC1.76□□□□□ -2.13
COL5A1P20908 AL355472.4-201ENST00000610233 626 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms