Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CAPN3P20807 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CAPN3P20807 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CAPN3P20807 AC093536.2-201ENST00000565257 1406 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.1□□□□□ -1.91
CAPN3P20807 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.1□□□□□ -1.91
CAPN3P20807 RNU6-461P-201ENST00000364195 107 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 Y_RNA.367-201ENST00000365544 101 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 SET-203ENST00000372688 801 ntTSL 2 BASIC3.1□□□□□ -1.91
CAPN3P20807 SNORD116-2-201ENST00000384274 95 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 RNU6-301P-201ENST00000384277 107 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 RNU6-166P-201ENST00000384371 107 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 RNU6-456P-201ENST00000384493 107 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 Y_RNA.553-201ENST00000384670 102 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 SNORD116-6-201ENST00000384711 96 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 MIR454-201ENST00000390180 115 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.1□□□□□ -1.91
CAPN3P20807 MYL8P-204ENST00000431574 518 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.1□□□□□ -1.91
CAPN3P20807 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.1□□□□□ -1.91
CAPN3P20807 HMGB1P30-201ENST00000492455 606 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 RPL22P13-201ENST00000493291 347 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 AC010424.1-201ENST00000506336 297 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.1□□□□□ -1.91
CAPN3P20807 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CAPN3P20807 RN7SKP298-201ENST00000515950 94 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 MTCO2P4-201ENST00000517968 247 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 OR5AL2P-201ENST00000532185 920 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.1□□□□□ -1.91
CAPN3P20807 AC012213.3-201ENST00000577199 777 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 MIR5680-201ENST00000577577 84 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 AC104984.5-201ENST00000586878 94 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 AC008521.1-201ENST00000587471 187 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.1□□□□□ -1.91
CAPN3P20807 AC005261.5-201ENST00000596280 355 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.1□□□□□ -1.91
CAPN3P20807 AC073648.5-201ENST00000603502 305 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 MIR7112-201ENST00000616126 65 ntBASIC3.1□□□□□ -1.91
CAPN3P20807 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CAPN3P20807 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CAPN3P20807 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.09□□□□□ -1.91
CAPN3P20807 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CAPN3P20807 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 RPL21P75-201ENST00000396599 483 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 RPL21P28-201ENST00000401418 483 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AL592114.1-201ENST00000403842 483 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 Y_RNA.623-201ENST00000411128 95 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 OR51A5P-201ENST00000415429 942 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.09□□□□□ -1.91
CAPN3P20807 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.09□□□□□ -1.91
CAPN3P20807 AL627311.1-201ENST00000431514 115 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 MTCO3P5-201ENST00000433620 714 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AC009969.1-201ENST00000438726 172 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 NDUFB1P2-201ENST00000449477 176 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AC006026.2-201ENST00000457376 180 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 RPL21P39-201ENST00000463605 483 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 RPL21P93-201ENST00000480465 489 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AC087190.1-201ENST00000484462 480 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AC011825.1-201ENST00000484967 388 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AC093591.1-201ENST00000491435 481 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 RPL21P16-201ENST00000495531 483 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AC110794.1-201ENST00000505816 425 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.09□□□□□ -1.91
CAPN3P20807 OR5AQ1P-201ENST00000527596 927 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.09□□□□□ -1.91
CAPN3P20807 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.09□□□□□ -1.91
CAPN3P20807 MIR5004-201ENST00000579078 107 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 MIR3117-201ENST00000584034 78 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 NBR2-204ENST00000587322 63 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.09□□□□□ -1.91
CAPN3P20807 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.09□□□□□ -1.91
CAPN3P20807 AL591516.1-201ENST00000611326 274 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 AC010678.1-201ENST00000614118 713 ntBASIC3.09□□□□□ -1.91
CAPN3P20807 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CAPN3P20807 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CAPN3P20807 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CAPN3P20807 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.09□□□□□ -1.92
CAPN3P20807 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CAPN3P20807 RNU6-1287P-201ENST00000362914 107 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 RNU6-898P-201ENST00000365627 104 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 RNU6-1060P-201ENST00000384664 107 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 BX682237.1-201ENST00000415016 335 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 NDUFB4P5-201ENST00000415445 361 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 MTCYBP5-201ENST00000423752 1135 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.08□□□□□ -1.92
CAPN3P20807 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.08□□□□□ -1.92
CAPN3P20807 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.08□□□□□ -1.92
CAPN3P20807 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.08□□□□□ -1.92
CAPN3P20807 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.08□□□□□ -1.92
CAPN3P20807 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.08□□□□□ -1.92
CAPN3P20807 Z83846.1-201ENST00000446798 265 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 AC104058.1-201ENST00000448028 297 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 AC012308.1-201ENST00000451232 178 ntBASIC3.08□□□□□ -1.92
CAPN3P20807 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.08□□□□□ -1.92
CAPN3P20807 AC097462.2-201ENST00000504623 481 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms