Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMNB1P20700 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMNB1P20700 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
LMNB1P20700 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
LMNB1P20700 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMNB1P20700 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMNB1P20700 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.81□□□□□ -1.64
LMNB1P20700 RNU6-1329P-201ENST00000365664 107 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 Y_RNA.452-201ENST00000384202 108 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 MRPS18CP6-201ENST00000423587 223 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 AL158071.1-201ENST00000430315 461 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 HMGB1P27-201ENST00000431429 603 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 HMGB1P12-201ENST00000438594 598 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 AC115115.1-201ENST00000449927 248 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 AL049874.1-201ENST00000489560 388 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 RPL23AP94-201ENST00000512518 302 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 APOOP4-201ENST00000513530 597 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 RNU6-927P-201ENST00000516199 100 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.81□□□□□ -1.64
LMNB1P20700 LRRC37A5P-203ENST00000580181 585 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 AC104695.3-201ENST00000604052 296 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 NUTF2P8-201ENST00000604593 363 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.81□□□□□ -1.64
LMNB1P20700 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.81□□□□□ -1.64
LMNB1P20700 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.81□□□□□ -1.64
LMNB1P20700 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMNB1P20700 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMNB1P20700 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.81□□□□□ -1.64
LMNB1P20700 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMNB1P20700 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMNB1P20700 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMNB1P20700 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.8□□□□□ -1.64
LMNB1P20700 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LMNB1P20700 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.8□□□□□ -1.64
LMNB1P20700 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.8□□□□□ -1.64
LMNB1P20700 UBE2L2-201ENST00000254302 429 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 Y_RNA.2-201ENST00000362330 96 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 RNU6-490P-201ENST00000362985 107 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 Y_RNA.153-201ENST00000363615 91 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 RNA5SP399-201ENST00000364003 117 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 RNA5SP235-201ENST00000365411 114 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 Y_RNA.480-201ENST00000384364 102 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 MIR517A-201ENST00000385001 87 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 RNU6-607P-201ENST00000411283 108 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 UBE2V1P4-201ENST00000425374 344 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 AC097713.2-201ENST00000430199 356 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 AL645568.3-201ENST00000433683 316 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.8□□□□□ -1.64
LMNB1P20700 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.8□□□□□ -1.64
LMNB1P20700 RANP8-201ENST00000444720 713 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.8□□□□□ -1.64
LMNB1P20700 RN7SL601P-201ENST00000471221 293 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 AC022493.1-201ENST00000492984 337 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.8□□□□□ -1.64
LMNB1P20700 VWA8P1-201ENST00000510889 176 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.8□□□□□ -1.64
LMNB1P20700 RNU1-86P-201ENST00000516108 154 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 RNU1-107P-201ENST00000516617 154 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 RNU7-143P-201ENST00000516781 65 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LMNB1P20700 MIR548AC-201ENST00000585049 88 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LMNB1P20700 OR4G2P-202ENST00000641004 1759 ntBASIC4.8□□□□□ -1.64
LMNB1P20700 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LMNB1P20700 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LMNB1P20700 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMNB1P20700 RNU1-108P-201ENST00000362556 161 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 Y_RNA.80-201ENST00000362996 102 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 RNU6-512P-201ENST00000364438 103 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 Y_RNA.485-201ENST00000384395 102 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 RNU6-907P-201ENST00000390924 102 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LMNB1P20700 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.79□□□□□ -1.64
LMNB1P20700 AL513331.1-201ENST00000411908 397 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 AC244098.2-201ENST00000422068 99 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.79□□□□□ -1.64
LMNB1P20700 RPS24P13-201ENST00000442520 397 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.79□□□□□ -1.64
LMNB1P20700 SNORD108-201ENST00000459332 71 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 AP001486.1-201ENST00000463339 476 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 AC108860.1-201ENST00000484521 383 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.79□□□□□ -1.64
LMNB1P20700 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.79□□□□□ -1.64
LMNB1P20700 SNORA31.20-201ENST00000517111 133 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LMNB1P20700 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.79□□□□□ -1.64
LMNB1P20700 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.79□□□□□ -1.64
LMNB1P20700 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.79□□□□□ -1.64
LMNB1P20700 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.79□□□□□ -1.64
LMNB1P20700 AC022968.1-201ENST00000567372 442 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.79□□□□□ -1.64
LMNB1P20700 FAM60BP-201ENST00000578364 658 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 MIR5692A1-201ENST00000580523 69 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 AC004825.2-201ENST00000616634 455 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 AL713922.2-201ENST00000619384 716 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 MIR7154-201ENST00000620673 73 ntBASIC4.79□□□□□ -1.64
LMNB1P20700 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LMNB1P20700 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms