Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.81□□□□□ -1.96
PDGFRAP16234 RPL23AP30-201ENST00000432419 501 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.81□□□□□ -1.96
PDGFRAP16234 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFRAP16234 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.81□□□□□ -1.96
PDGFRAP16234 AL022238.1-201ENST00000442557 355 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 MRPL50P4-201ENST00000446432 475 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 HMGN2P10-201ENST00000448085 265 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFRAP16234 SNORD109B-201ENST00000458961 67 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 SNORD109A-201ENST00000459128 67 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 TRBV1-201ENST00000476502 284 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 AC109927.2-201ENST00000506416 303 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.81□□□□□ -1.96
PDGFRAP16234 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 Y_RNA.689-201ENST00000516589 107 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFRAP16234 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFRAP16234 AC021739.1-201ENST00000559631 174 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.81□□□□□ -1.96
PDGFRAP16234 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFRAP16234 NRBF2P1-201ENST00000587407 859 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.81□□□□□ -1.96
PDGFRAP16234 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFRAP16234 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PDGFRAP16234 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDGFRAP16234 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDGFRAP16234 AC135776.4-201ENST00000624300 1904 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AC010889.1-201ENST00000566193 2666 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 RNU6-169P-201ENST00000365336 107 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 SNORA4.3-201ENST00000365564 137 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AL513475.1-201ENST00000406602 315 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 RNU2-39P-201ENST00000410604 198 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC092809.3-201ENST00000415453 231 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC009518.2-201ENST00000418056 731 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AC098826.1-201ENST00000433943 471 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 RPL39P40-201ENST00000445481 146 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC108938.1-201ENST00000451204 136 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AC107626.1-201ENST00000471084 183 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 RN7SL297P-201ENST00000483161 293 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC098591.2-201ENST00000510152 315 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 RNU6-1315P-201ENST00000517187 99 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC009902.1-201ENST00000519351 183 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.8□□□□□ -1.96
PDGFRAP16234 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.8□□□□□ -1.96
PDGFRAP16234 MIR4635-201ENST00000583759 79 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AC023043.3-201ENST00000593113 385 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC090578.1-201ENST00000604955 591 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC007938.3-201ENST00000604965 623 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 OR2AS2P-201ENST00000606902 342 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 MIR15A-201ENST00000607334 83 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AL359198.2-201ENST00000611836 194 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 AC073114.1-201ENST00000612027 490 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.8□□□□□ -1.96
PDGFRAP16234 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.8□□□□□ -1.96
PDGFRAP16234 AC062016.1-201ENST00000355719 319 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 RN7SKP226-201ENST00000364912 300 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDGFRAP16234 SET-203ENST00000372688 801 ntTSL 2 BASIC2.79□□□□□ -1.96
PDGFRAP16234 MIR9-1-201ENST00000385198 89 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 RNU6-248P-201ENST00000410720 107 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AC080125.1-201ENST00000414888 684 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AC114491.1-201ENST00000416095 246 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 SUMO1P4-201ENST00000429430 302 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AC073614.1-201ENST00000438690 650 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 OSTCP8-201ENST00000445117 448 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDGFRAP16234 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFRAP16234 GSTA11P-201ENST00000452866 669 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AC117522.1-201ENST00000509821 380 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AC008716.1-201ENST00000511084 513 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 RNA5SP76-201ENST00000516277 87 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 SNORD19.2-201ENST00000516978 73 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AC087883.1-201ENST00000551882 391 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFRAP16234 AC007151.1-201ENST00000572774 483 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AC137800.2-201ENST00000574375 120 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 MIR1273C-201ENST00000578669 77 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.79□□□□□ -1.96
PDGFRAP16234 NRBF2P5-201ENST00000603087 788 ntBASIC2.79□□□□□ -1.96
PDGFRAP16234 RPL12P50-201ENST00000603116 116 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms