Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CFTRP13569 SNORA48.11-201ENST00000517015 89 ntBASIC1.24□□□□□ -2.21
CFTRP13569 SCARNA3-201ENST00000517097 143 ntBASIC1.24□□□□□ -2.21
CFTRP13569 AL133241.1-201ENST00000556832 487 ntBASIC1.24□□□□□ -2.21
CFTRP13569 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.24□□□□□ -2.21
CFTRP13569 AC103810.8-201ENST00000607347 118 ntBASIC1.24□□□□□ -2.21
CFTRP13569 AC018926.3-201ENST00000618841 406 ntBASIC1.24□□□□□ -2.21
CFTRP13569 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.24□□□□□ -2.21
CFTRP13569 AC007785.2-201ENST00000598627 1916 ntBASIC1.23□□□□□ -2.21
CFTRP13569 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CFTRP13569 RN7SKP61-201ENST00000410642 295 ntBASIC1.23□□□□□ -2.21
CFTRP13569 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.23□□□□□ -2.21
CFTRP13569 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.23□□□□□ -2.21
CFTRP13569 AL592447.1-201ENST00000447592 540 ntBASIC1.23□□□□□ -2.21
CFTRP13569 AC104073.1-201ENST00000451988 151 ntBASIC1.23□□□□□ -2.21
CFTRP13569 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.23□□□□□ -2.21
CFTRP13569 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CFTRP13569 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CFTRP13569 RNU6-202P-201ENST00000515998 96 ntBASIC1.23□□□□□ -2.21
CFTRP13569 AC025857.1-201ENST00000525252 377 ntBASIC1.23□□□□□ -2.21
CFTRP13569 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.23□□□□□ -2.21
CFTRP13569 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.23□□□□□ -2.21
CFTRP13569 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.23□□□□□ -2.21
CFTRP13569 AC005786.1-201ENST00000588553 154 ntBASIC1.23□□□□□ -2.21
CFTRP13569 AC090970.3-201ENST00000612566 866 ntBASIC1.23□□□□□ -2.21
CFTRP13569 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.23□□□□□ -2.21
CFTRP13569 AL109659.3-201ENST00000624985 950 ntBASIC1.23□□□□□ -2.21
CFTRP13569 U6.107-201ENST00000637108 79 ntBASIC1.23□□□□□ -2.21
CFTRP13569 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
CFTRP13569 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CFTRP13569 MIR126-201ENST00000362291 85 ntBASIC1.22□□□□□ -2.21
CFTRP13569 MIR218-1-201ENST00000384999 110 ntBASIC1.22□□□□□ -2.21
CFTRP13569 MIR1290-201ENST00000408735 78 ntBASIC1.22□□□□□ -2.21
CFTRP13569 MICF-203ENST00000432679 129 ntBASIC1.22□□□□□ -2.21
CFTRP13569 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC1.22□□□□□ -2.21
CFTRP13569 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.22□□□□□ -2.21
CFTRP13569 AC117503.1-201ENST00000472241 394 ntBASIC1.22□□□□□ -2.21
CFTRP13569 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.22□□□□□ -2.21
CFTRP13569 MIR3126-201ENST00000577443 74 ntBASIC1.22□□□□□ -2.21
CFTRP13569 AL021997.1-201ENST00000605757 193 ntBASIC1.22□□□□□ -2.21
CFTRP13569 AC068276.1-201ENST00000605793 379 ntBASIC1.22□□□□□ -2.21
CFTRP13569 AC004775.1-201ENST00000607389 753 ntBASIC1.22□□□□□ -2.21
CFTRP13569 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CFTRP13569 MIR325-201ENST00000385260 98 ntBASIC1.21□□□□□ -2.22
CFTRP13569 RN7SKP200-201ENST00000410564 320 ntBASIC1.21□□□□□ -2.22
CFTRP13569 AL158823.1-201ENST00000418441 478 ntBASIC1.21□□□□□ -2.22
CFTRP13569 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.21□□□□□ -2.22
CFTRP13569 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.21□□□□□ -2.22
CFTRP13569 DDX3P2-201ENST00000446138 111 ntBASIC1.21□□□□□ -2.22
CFTRP13569 VPS26AP1-201ENST00000483197 979 ntBASIC1.21□□□□□ -2.22
CFTRP13569 AC098862.1-201ENST00000504991 413 ntBASIC1.21□□□□□ -2.22
CFTRP13569 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.21□□□□□ -2.22
CFTRP13569 MIR892C-201ENST00000516410 77 ntBASIC1.21□□□□□ -2.22
CFTRP13569 EEF1B2P4-201ENST00000551398 348 ntBASIC1.21□□□□□ -2.22
CFTRP13569 GAS5-AS1-201ENST00000602767 694 ntBASIC1.21□□□□□ -2.22
CFTRP13569 MIR2909-201ENST00000617113 69 ntBASIC1.21□□□□□ -2.22
CFTRP13569 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.21□□□□□ -2.22
CFTRP13569 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CFTRP13569 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CFTRP13569 RNU6-670P-201ENST00000364312 104 ntBASIC1.2□□□□□ -2.22
CFTRP13569 RNU6-16P-201ENST00000384385 107 ntBASIC1.2□□□□□ -2.22
CFTRP13569 OR9R1P-201ENST00000412200 877 ntBASIC1.2□□□□□ -2.22
CFTRP13569 EDDM3CP-201ENST00000415977 425 ntBASIC1.2□□□□□ -2.22
CFTRP13569 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.2□□□□□ -2.22
CFTRP13569 SDAD1P3-201ENST00000427380 333 ntBASIC1.2□□□□□ -2.22
CFTRP13569 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.2□□□□□ -2.22
CFTRP13569 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.2□□□□□ -2.22
CFTRP13569 RAC1P7-201ENST00000445367 377 ntBASIC1.2□□□□□ -2.22
CFTRP13569 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.2□□□□□ -2.22
CFTRP13569 MTCYBP23-201ENST00000558717 1102 ntBASIC1.2□□□□□ -2.22
CFTRP13569 SUMO2P14-201ENST00000604488 293 ntBASIC1.2□□□□□ -2.22
CFTRP13569 AC010738.1-201ENST00000604970 987 ntBASIC1.2□□□□□ -2.22
CFTRP13569 AC009229.3-201ENST00000608056 282 ntBASIC1.2□□□□□ -2.22
CFTRP13569 AL356473.1-201ENST00000406203 1408 ntBASIC1.2□□□□□ -2.22
CFTRP13569 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CFTRP13569 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CFTRP13569 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CFTRP13569 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.19□□□□□ -2.22
CFTRP13569 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.19□□□□□ -2.22
CFTRP13569 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.19□□□□□ -2.22
CFTRP13569 RNU6-496P-201ENST00000516145 99 ntBASIC1.19□□□□□ -2.22
CFTRP13569 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.19□□□□□ -2.22
CFTRP13569 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.19□□□□□ -2.22
CFTRP13569 CYP4A27P-201ENST00000567218 190 ntBASIC1.19□□□□□ -2.22
CFTRP13569 AL031775.1-201ENST00000607014 887 ntBASIC1.19□□□□□ -2.22
CFTRP13569 AC090772.4-201ENST00000623599 362 ntBASIC1.19□□□□□ -2.22
CFTRP13569 MIR7157-201ENST00000635801 60 ntBASIC1.19□□□□□ -2.22
CFTRP13569 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.19□□□□□ -2.22
CFTRP13569 AC025263.3-201ENST00000622965 1396 ntBASIC1.19□□□□□ -2.22
CFTRP13569 TAF9BP2-201ENST00000400856 499 ntBASIC1.18□□□□□ -2.22
CFTRP13569 AC023141.4-201ENST00000412031 328 ntBASIC1.18□□□□□ -2.22
CFTRP13569 AC018630.2-202ENST00000422992 927 ntBASIC1.18□□□□□ -2.22
CFTRP13569 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.18□□□□□ -2.22
CFTRP13569 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CFTRP13569 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.18□□□□□ -2.22
CFTRP13569 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.18□□□□□ -2.22
CFTRP13569 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.18□□□□□ -2.22
CFTRP13569 AC114786.4-201ENST00000508771 728 ntBASIC1.18□□□□□ -2.22
CFTRP13569 AC114797.1-201ENST00000514003 728 ntBASIC1.18□□□□□ -2.22
CFTRP13569 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms