Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.05□□□□□ -1.76
SNRPA1P09661 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.05□□□□□ -1.76
SNRPA1P09661 FABP5P13-201ENST00000452144 328 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 RNU6-1208P-201ENST00000459588 107 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 AC004801.2-202ENST00000463559 283 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 NDUFB4P9-201ENST00000511646 388 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.05□□□□□ -1.76
SNRPA1P09661 SCARNA15.1-201ENST00000516384 125 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 AP001804.3-201ENST00000525146 880 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 AL137161.1-201ENST00000532231 390 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.05□□□□□ -1.76
SNRPA1P09661 AC008521.1-201ENST00000587471 187 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 AC025946.2-201ENST00000603398 234 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 AL022099.1-201ENST00000604551 712 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 AL133255.1-201ENST00000606374 441 ntBASIC4.05□□□□□ -1.76
SNRPA1P09661 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNRPA1P09661 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SNRPA1P09661 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SNRPA1P09661 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SNRPA1P09661 TPTE2P4-201ENST00000258589 1605 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 SNORA80A-201ENST00000363922 136 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 SNORA54-201ENST00000384281 123 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 AL592114.1-201ENST00000403842 483 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 RN7SKP220-201ENST00000410611 288 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 RN7SKP140-201ENST00000411196 284 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 PPP1R11P2-201ENST00000423543 382 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.04□□□□□ -1.76
SNRPA1P09661 HMGN2P7-201ENST00000456186 273 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 Y_RNA.632-201ENST00000459189 102 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 RNU7-66P-201ENST00000459469 62 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 AC098591.2-201ENST00000510152 315 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SNRPA1P09661 RNU6-273P-201ENST00000516937 96 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 OR5D17P-201ENST00000531492 978 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 AC093012.1-202ENST00000549403 582 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 RPL23AP84-201ENST00000571193 464 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.04□□□□□ -1.76
SNRPA1P09661 BNIP3P25-201ENST00000596023 559 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 DUSP12P1-201ENST00000612874 516 ntBASIC4.04□□□□□ -1.76
SNRPA1P09661 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNRPA1P09661 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.03□□□□□ -1.76
SNRPA1P09661 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNRPA1P09661 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNRPA1P09661 RNU6-1252P-201ENST00000363054 104 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 Y_RNA.167-201ENST00000363735 109 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 U3.12-201ENST00000364498 214 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 SNORD15B-201ENST00000384714 146 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 RNU4-46P-201ENST00000410818 138 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 NCOR1P3-201ENST00000420479 303 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.03□□□□□ -1.76
SNRPA1P09661 RPL21P112-201ENST00000434403 463 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.03□□□□□ -1.76
SNRPA1P09661 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.03□□□□□ -1.76
SNRPA1P09661 MRPS31P2-201ENST00000451581 518 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.03□□□□□ -1.76
SNRPA1P09661 RPL21P8-201ENST00000465083 535 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 RPL31P13-201ENST00000484151 370 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 AC097462.2-201ENST00000504623 481 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.03□□□□□ -1.76
SNRPA1P09661 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.03□□□□□ -1.76
SNRPA1P09661 RNU6-123P-201ENST00000516163 102 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.03□□□□□ -1.76
SNRPA1P09661 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.03□□□□□ -1.76
SNRPA1P09661 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.03□□□□□ -1.76
SNRPA1P09661 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.03□□□□□ -1.76
SNRPA1P09661 MIR3942-201ENST00000585264 109 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.03□□□□□ -1.76
SNRPA1P09661 AL158032.1-201ENST00000605401 106 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 AC007619.2-201ENST00000605743 379 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.03□□□□□ -1.76
SNRPA1P09661 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNRPA1P09661 AC012531.5-201ENST00000611375 151 ntBASIC4.03□□□□□ -1.76
SNRPA1P09661 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNRPA1P09661 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SNRPA1P09661 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNRPA1P09661 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNRPA1P09661 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.02□□□□□ -1.77
SNRPA1P09661 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNRPA1P09661 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNRPA1P09661 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SNRPA1P09661 SNORA7.2-201ENST00000364446 145 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.02□□□□□ -1.77
SNRPA1P09661 Y_RNA.384-201ENST00000383909 102 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 Y_RNA.414-201ENST00000384011 101 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 Y_RNA.530-201ENST00000384587 101 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 MIR607-201ENST00000385241 96 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 RNU6-882P-201ENST00000391025 103 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 MIR1302-11-201ENST00000408051 138 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 MIR1302-9-201ENST00000408365 138 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 MIR1302-10-201ENST00000408734 138 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 MIR1183-201ENST00000408856 89 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.02□□□□□ -1.77
SNRPA1P09661 RAC1P3-201ENST00000416129 580 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 ARL5AP1-201ENST00000418991 388 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 AC244098.2-201ENST00000422068 99 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.02□□□□□ -1.77
SNRPA1P09661 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.02□□□□□ -1.77
SNRPA1P09661 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms