Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PSMA3P-201ENST00000555485 635 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.07□□□□□ -2.24
CXCL1P09341 ZNF971P-201ENST00000562068 1249 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 MIR3683-201ENST00000580847 82 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.07□□□□□ -2.24
CXCL1P09341 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.07□□□□□ -2.24
CXCL1P09341 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.07□□□□□ -2.24
CXCL1P09341 AC021646.1-201ENST00000605469 484 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.07□□□□□ -2.24
CXCL1P09341 AC009318.2-201ENST00000610917 651 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 AC091834.1-201ENST00000614543 472 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 ZNF680P1-201ENST00000436625 1469 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 MIR424-201ENST00000362227 98 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CXCL1P09341 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CXCL1P09341 U8.13-201ENST00000390842 128 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 MIR1323-201ENST00000408090 73 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 RNU4-26P-201ENST00000410270 107 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.06□□□□□ -2.24
CXCL1P09341 C1DP1-201ENST00000426049 402 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CXCL1P09341 AC244035.1-201ENST00000430042 390 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 TRIM60P13-201ENST00000432350 1283 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCL1P09341 SSXP1-201ENST00000453640 473 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 AC112492.4-201ENST00000456549 352 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.06□□□□□ -2.24
CXCL1P09341 AC006512.1-201ENST00000468816 291 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.06□□□□□ -2.24
CXCL1P09341 RNU6-714P-201ENST00000516963 103 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 SNORA31.24-201ENST00000517232 57 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
CXCL1P09341 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCL1P09341 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.06□□□□□ -2.24
CXCL1P09341 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCL1P09341 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCL1P09341 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCL1P09341 ELOCP5-201ENST00000604924 333 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 AC116312.1-201ENST00000606841 314 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 AC009237.15-201ENST00000610252 501 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 TUG1_2.1-201ENST00000614234 87 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 AL357080.1-201ENST00000617394 239 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 AC010975.3-201ENST00000618727 978 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 AC019226.1-201ENST00000625666 515 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CXCL1P09341 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CXCL1P09341 AP000776.1-201ENST00000530032 1663 ntBASIC1.06□□□□□ -2.24
CXCL1P09341 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CXCL1P09341 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
CXCL1P09341 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CXCL1P09341 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CXCL1P09341 RNU6-223P-201ENST00000362830 107 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 RNU1-23P-201ENST00000363361 144 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AL627390.1-201ENST00000396055 340 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AC010153.1-201ENST00000432862 727 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.05□□□□□ -2.24
CXCL1P09341 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.05□□□□□ -2.24
CXCL1P09341 RPL7P55-201ENST00000450522 746 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AC008481.1-201ENST00000463278 396 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 MTND5P13-201ENST00000513046 1079 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 OR5B19P-201ENST00000531766 928 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AK6P1-201ENST00000540219 478 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AC006518.2-201ENST00000542513 940 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 YWHAZP1-201ENST00000556286 722 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AC023825.1-201ENST00000566704 1030 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 SNORD53B-201ENST00000577887 78 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.05□□□□□ -2.24
CXCL1P09341 AC010900.2-201ENST00000604508 210 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 PRR13P7-201ENST00000605538 430 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 RNU6-91P-201ENST00000607774 107 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 AC017037.3-201ENST00000625016 472 ntBASIC1.05□□□□□ -2.24
CXCL1P09341 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CXCL1P09341 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CXCL1P09341 NACAP2-201ENST00000318548 624 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.04□□□□□ -2.24
CXCL1P09341 U8.2-201ENST00000363156 134 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 RNU6-1167P-201ENST00000363227 94 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 RNU6-792P-201ENST00000363490 107 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.04□□□□□ -2.24
CXCL1P09341 SNORD26-201ENST00000384147 75 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 RNU1-57P-201ENST00000384491 166 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 AL035407.1-201ENST00000429211 571 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 GXYLT1P1-201ENST00000446657 490 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.04□□□□□ -2.24
CXCL1P09341 UBE2DNL-203ENST00000474922 222 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 RPS15AP36-201ENST00000492022 382 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 AC110760.3-202ENST00000515177 371 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 SNORA25.11-201ENST00000515935 105 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 SNORA25.15-201ENST00000516487 89 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 snoZ278.1-201ENST00000517059 112 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 AC023632.1-201ENST00000518463 375 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.04□□□□□ -2.24
CXCL1P09341 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.04□□□□□ -2.24
CXCL1P09341 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.04□□□□□ -2.24
CXCL1P09341 AC138915.2-201ENST00000569776 97 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 RMST_6.1-201ENST00000611980 203 ntBASIC1.04□□□□□ -2.24
CXCL1P09341 MIR6845-201ENST00000613182 61 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 510.8 ms