Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC023824.2-201ENST00000566185 400 ntBASIC2.4□□□□□ -2.03
MBD3O95983 AC024619.4-201ENST00000580924 316 ntBASIC2.4□□□□□ -2.03
MBD3O95983 BNIP3P9-201ENST00000603714 553 ntBASIC2.4□□□□□ -2.03
MBD3O95983 AC121334.2-201ENST00000605387 271 ntBASIC2.4□□□□□ -2.03
MBD3O95983 AC034229.4-201ENST00000607861 441 ntBASIC2.4□□□□□ -2.03
MBD3O95983 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.4□□□□□ -2.03
MBD3O95983 CTSLP2-204ENST00000629029 392 ntBASIC2.4□□□□□ -2.03
MBD3O95983 CU459211.1-201ENST00000635667 749 ntBASIC2.4□□□□□ -2.03
MBD3O95983 AC092104.1-201ENST00000497346 1441 ntBASIC2.4□□□□□ -2.03
MBD3O95983 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.4□□□□□ -2.03
MBD3O95983 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
MBD3O95983 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MBD3O95983 MTND5P30-201ENST00000452896 1731 ntBASIC2.39□□□□□ -2.03
MBD3O95983 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.39□□□□□ -2.03
MBD3O95983 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
MBD3O95983 AC080128.1-201ENST00000474389 1917 ntBASIC2.39□□□□□ -2.03
MBD3O95983 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.39□□□□□ -2.03
MBD3O95983 RNU5E-6P-201ENST00000365574 115 ntBASIC2.39□□□□□ -2.03
MBD3O95983 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MBD3O95983 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.39□□□□□ -2.03
MBD3O95983 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 XKRYP1-201ENST00000423438 492 ntBASIC2.39□□□□□ -2.03
MBD3O95983 AL591704.1-201ENST00000432574 275 ntBASIC2.39□□□□□ -2.03
MBD3O95983 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 XKRYP2-201ENST00000432915 492 ntBASIC2.39□□□□□ -2.03
MBD3O95983 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 AL109933.2-201ENST00000452651 260 ntBASIC2.39□□□□□ -2.03
MBD3O95983 AC080013.2-201ENST00000460866 323 ntBASIC2.39□□□□□ -2.03
MBD3O95983 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MBD3O95983 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.39□□□□□ -2.03
MBD3O95983 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.39□□□□□ -2.03
MBD3O95983 AC011979.2-201ENST00000527568 352 ntBASIC2.39□□□□□ -2.03
MBD3O95983 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.39□□□□□ -2.03
MBD3O95983 AC234772.3-201ENST00000602277 528 ntBASIC2.39□□□□□ -2.03
MBD3O95983 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.39□□□□□ -2.03
MBD3O95983 AC091152.3-201ENST00000604227 325 ntBASIC2.39□□□□□ -2.03
MBD3O95983 APOOP1-201ENST00000604695 592 ntBASIC2.39□□□□□ -2.03
MBD3O95983 AC007363.1-201ENST00000604736 620 ntBASIC2.39□□□□□ -2.03
MBD3O95983 AC103710.2-201ENST00000609912 942 ntBASIC2.39□□□□□ -2.03
MBD3O95983 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MBD3O95983 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.39□□□□□ -2.03
MBD3O95983 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.39□□□□□ -2.03
MBD3O95983 MTND5P42-201ENST00000637720 498 ntBASIC2.39□□□□□ -2.03
MBD3O95983 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.39□□□□□ -2.03
MBD3O95983 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
MBD3O95983 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.39□□□□□ -2.03
MBD3O95983 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
MBD3O95983 SNORA38-201ENST00000363946 132 ntBASIC2.38□□□□□ -2.03
MBD3O95983 RNU6-660P-201ENST00000364566 109 ntBASIC2.38□□□□□ -2.03
MBD3O95983 MIR301A-201ENST00000385261 86 ntBASIC2.38□□□□□ -2.03
MBD3O95983 SUMO2P12-201ENST00000405924 140 ntBASIC2.38□□□□□ -2.03
MBD3O95983 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.38□□□□□ -2.03
MBD3O95983 RPS12P24-201ENST00000412619 387 ntBASIC2.38□□□□□ -2.03
MBD3O95983 AC104454.1-201ENST00000421341 1401 ntBASIC2.38□□□□□ -2.03
MBD3O95983 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.38□□□□□ -2.03
MBD3O95983 AL008629.1-201ENST00000438615 184 ntBASIC2.38□□□□□ -2.03
MBD3O95983 AL161651.1-201ENST00000440882 223 ntBASIC2.38□□□□□ -2.03
MBD3O95983 RNU6-415P-201ENST00000516252 97 ntBASIC2.38□□□□□ -2.03
MBD3O95983 RNU6-1092P-201ENST00000516955 87 ntBASIC2.38□□□□□ -2.03
MBD3O95983 AC027176.1-201ENST00000560204 514 ntBASIC2.38□□□□□ -2.03
MBD3O95983 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.38□□□□□ -2.03
MBD3O95983 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.38□□□□□ -2.03
MBD3O95983 RPS3AP23-202ENST00000574601 686 ntBASIC2.38□□□□□ -2.03
MBD3O95983 AC022022.2-201ENST00000602989 360 ntBASIC2.38□□□□□ -2.03
MBD3O95983 AL391813.2-201ENST00000609113 322 ntBASIC2.38□□□□□ -2.03
MBD3O95983 AC108747.1-201ENST00000609508 535 ntBASIC2.38□□□□□ -2.03
MBD3O95983 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.38□□□□□ -2.03
MBD3O95983 AC010149.2-201ENST00000637608 315 ntBASIC2.38□□□□□ -2.03
MBD3O95983 ADAM3A-203ENST00000461344 2157 ntBASIC2.37□□□□□ -2.03
MBD3O95983 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
MBD3O95983 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.37□□□□□ -2.03
MBD3O95983 RNU6-501P-201ENST00000364072 100 ntBASIC2.37□□□□□ -2.03
MBD3O95983 Z92545.1-201ENST00000411782 234 ntBASIC2.37□□□□□ -2.03
MBD3O95983 AC096664.2-201ENST00000411843 406 ntBASIC2.37□□□□□ -2.03
MBD3O95983 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.37□□□□□ -2.03
MBD3O95983 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.37□□□□□ -2.03
MBD3O95983 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.37□□□□□ -2.03
MBD3O95983 USP9YP8-201ENST00000441913 500 ntBASIC2.37□□□□□ -2.03
MBD3O95983 AC116347.2-201ENST00000514912 523 ntBASIC2.37□□□□□ -2.03
MBD3O95983 RNU4-29P-201ENST00000515943 174 ntBASIC2.37□□□□□ -2.03
MBD3O95983 SNORA3.4-201ENST00000515969 96 ntBASIC2.37□□□□□ -2.03
MBD3O95983 SNORA31.6-201ENST00000516241 130 ntBASIC2.37□□□□□ -2.03
MBD3O95983 RNA5SP281-201ENST00000516504 135 ntBASIC2.37□□□□□ -2.03
MBD3O95983 SCARNA3-201ENST00000517097 143 ntBASIC2.37□□□□□ -2.03
MBD3O95983 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
MBD3O95983 AC022616.6-201ENST00000520479 119 ntBASIC2.37□□□□□ -2.03
MBD3O95983 AC107934.1-201ENST00000522215 217 ntBASIC2.37□□□□□ -2.03
MBD3O95983 AP003122.3-201ENST00000526316 255 ntBASIC2.37□□□□□ -2.03
MBD3O95983 AC084851.1-201ENST00000529105 249 ntBASIC2.37□□□□□ -2.03
MBD3O95983 AC135628.1-201ENST00000568867 534 ntBASIC2.37□□□□□ -2.03
MBD3O95983 MIR3200-201ENST00000580767 85 ntBASIC2.37□□□□□ -2.03
MBD3O95983 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.37□□□□□ -2.03
MBD3O95983 AC005261.5-201ENST00000596280 355 ntBASIC2.37□□□□□ -2.03
MBD3O95983 MIR7844-201ENST00000616161 122 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms