Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AL773524.1-201ENST00000614065 229 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC040168.1-201ENST00000623594 991 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC073592.7-201ENST00000623659 507 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
ABCA1O95477 RNU6-252P-201ENST00000363232 107 ntBASIC0.88□□□□□ -2.27
ABCA1O95477 RNA5SP62-201ENST00000363457 110 ntBASIC0.88□□□□□ -2.27
ABCA1O95477 AL358176.2-201ENST00000425769 204 ntBASIC0.88□□□□□ -2.27
ABCA1O95477 AC026801.1-201ENST00000497178 464 ntBASIC0.88□□□□□ -2.27
ABCA1O95477 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
ABCA1O95477 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.88□□□□□ -2.27
ABCA1O95477 AP003066.2-201ENST00000529375 555 ntBASIC0.88□□□□□ -2.27
ABCA1O95477 AL078605.1-201ENST00000603529 500 ntBASIC0.88□□□□□ -2.27
ABCA1O95477 AL161729.4-201ENST00000604650 476 ntBASIC0.88□□□□□ -2.27
ABCA1O95477 AL450336.1-201ENST00000605180 586 ntBASIC0.88□□□□□ -2.27
ABCA1O95477 AC090970.3-201ENST00000612566 866 ntBASIC0.88□□□□□ -2.27
ABCA1O95477 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
ABCA1O95477 RNU1-148P-201ENST00000384472 162 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 MIR514A1-201ENST00000385133 98 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 MIR513A1-201ENST00000385138 129 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 OR9N1P-202ENST00000494289 481 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.87□□□□□ -2.27
ABCA1O95477 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 AC096745.1-201ENST00000509945 370 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 MIR892C-201ENST00000516410 77 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 AC079148.1-201ENST00000565944 819 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 AC022513.1-201ENST00000624512 117 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 ICE2P2-201ENST00000483823 2787 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 RNU6-543P-201ENST00000362576 108 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 RNU6-270P-201ENST00000364131 105 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 SNORD26-201ENST00000384147 75 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 MIR934-201ENST00000401241 83 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 BPY2DP-201ENST00000422208 265 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 NANOGP2-201ENST00000435391 727 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.87□□□□□ -2.27
ABCA1O95477 snoU109.1-201ENST00000459339 135 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 AC117503.1-201ENST00000472241 394 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.87□□□□□ -2.27
ABCA1O95477 COX7A2P2-201ENST00000505291 250 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.87□□□□□ -2.27
ABCA1O95477 AC107953.1-201ENST00000522216 297 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 AC008269.2-201ENST00000561915 1105 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.87□□□□□ -2.27
ABCA1O95477 FTX_3.1-201ENST00000610451 147 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.87□□□□□ -2.27
ABCA1O95477 U6.101-201ENST00000637707 76 ntBASIC0.87□□□□□ -2.27
ABCA1O95477 AL121978.1-201ENST00000402778 359 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 USP9YP33-201ENST00000412220 421 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 USP9YP35-201ENST00000435696 412 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AC016691.1-201ENST00000441321 413 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.86□□□□□ -2.27
ABCA1O95477 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.86□□□□□ -2.27
ABCA1O95477 SCARNA15.2-201ENST00000516409 127 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.86□□□□□ -2.27
ABCA1O95477 ARL2BPP5-201ENST00000523141 481 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.86□□□□□ -2.27
ABCA1O95477 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.86□□□□□ -2.27
ABCA1O95477 AC069294.1-201ENST00000608397 350 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 DUXAP10-204ENST00000612052 616 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AC011939.3-201ENST00000613686 466 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
ABCA1O95477 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
ABCA1O95477 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 RPL22P22-201ENST00000395439 379 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.86□□□□□ -2.27
ABCA1O95477 AL355615.1-201ENST00000406187 641 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 RNU2-47P-201ENST00000410649 186 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 ZNF863P-201ENST00000426746 417 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 RAD1P2-201ENST00000446414 663 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AL583843.1-201ENST00000456070 346 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 RPL30P12-201ENST00000474666 353 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AC020699.1-201ENST00000505161 445 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
ABCA1O95477 FAM206BP-201ENST00000510179 541 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AC091965.2-201ENST00000512324 613 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 RN7SKP179-201ENST00000516126 217 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.86□□□□□ -2.27
ABCA1O95477 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.86□□□□□ -2.27
ABCA1O95477 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.86□□□□□ -2.27
ABCA1O95477 AC010889.1-201ENST00000566193 2666 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 DUXAP11-201ENST00000603858 526 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.86□□□□□ -2.27
ABCA1O95477 AC108706.1-201ENST00000611053 297 ntBASIC0.86□□□□□ -2.27
ABCA1O95477 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
ABCA1O95477 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
ABCA1O95477 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 MTCO1P18-201ENST00000455518 1419 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 SNORA23-201ENST00000365128 182 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AL356421.1-201ENST00000403255 413 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 AL158823.1-201ENST00000418441 478 ntBASIC0.85□□□□□ -2.27
ABCA1O95477 MTND5P25-201ENST00000430499 799 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms