Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR6852-201ENST00000621699 66 ntBASIC3.28□□□□□ -1.88
MBD4O95243 U6.99-201ENST00000637524 83 ntBASIC3.28□□□□□ -1.88
MBD4O95243 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.28□□□□□ -1.88
MBD4O95243 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MBD4O95243 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MBD4O95243 ADAM3A-203ENST00000461344 2157 ntBASIC3.28□□□□□ -1.88
MBD4O95243 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
MBD4O95243 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.27□□□□□ -1.89
MBD4O95243 Y_RNA.33-201ENST00000362591 102 ntBASIC3.27□□□□□ -1.89
MBD4O95243 RNU6-179P-201ENST00000363350 107 ntBASIC3.27□□□□□ -1.89
MBD4O95243 RNU6-395P-201ENST00000365662 106 ntBASIC3.27□□□□□ -1.89
MBD4O95243 SNORA24.1-201ENST00000384401 135 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AL356057.3-201ENST00000402607 340 ntBASIC3.27□□□□□ -1.89
MBD4O95243 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.27□□□□□ -1.89
MBD4O95243 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.27□□□□□ -1.89
MBD4O95243 RNU6-387P-201ENST00000411331 105 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AC114491.1-201ENST00000416095 246 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AL513477.1-202ENST00000417061 214 ntBASIC3.27□□□□□ -1.89
MBD4O95243 RPL7P10-201ENST00000417407 739 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.27□□□□□ -1.89
MBD4O95243 PIGFP2-201ENST00000421400 651 ntBASIC3.27□□□□□ -1.89
MBD4O95243 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.27□□□□□ -1.89
MBD4O95243 AC112220.1-201ENST00000434628 355 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.27□□□□□ -1.89
MBD4O95243 AC090525.1-201ENST00000479116 478 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.27□□□□□ -1.89
MBD4O95243 AC117532.1-201ENST00000514638 323 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.27□□□□□ -1.89
MBD4O95243 SNORD19.2-201ENST00000516978 73 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AC009902.1-201ENST00000519351 183 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.27□□□□□ -1.89
MBD4O95243 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.27□□□□□ -1.89
MBD4O95243 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.27□□□□□ -1.89
MBD4O95243 MIR4782-201ENST00000577987 79 ntBASIC3.27□□□□□ -1.89
MBD4O95243 AC024619.4-201ENST00000580924 316 ntBASIC3.27□□□□□ -1.89
MBD4O95243 CU459211.1-201ENST00000635667 749 ntBASIC3.27□□□□□ -1.89
MBD4O95243 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MBD4O95243 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MBD4O95243 AC010889.1-201ENST00000566193 2666 ntBASIC3.26□□□□□ -1.89
MBD4O95243 MIR26A1-201ENST00000362205 77 ntBASIC3.26□□□□□ -1.89
MBD4O95243 RNU6-1097P-201ENST00000363586 107 ntBASIC3.26□□□□□ -1.89
MBD4O95243 RNU6-108P-201ENST00000365558 107 ntBASIC3.26□□□□□ -1.89
MBD4O95243 SNORA4.3-201ENST00000365564 137 ntBASIC3.26□□□□□ -1.89
MBD4O95243 Y_RNA.553-201ENST00000384670 102 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
MBD4O95243 RNU6-1025P-201ENST00000410629 104 ntBASIC3.26□□□□□ -1.89
MBD4O95243 NUP35P1-201ENST00000422734 947 ntBASIC3.26□□□□□ -1.89
MBD4O95243 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.26□□□□□ -1.89
MBD4O95243 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.26□□□□□ -1.89
MBD4O95243 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.26□□□□□ -1.89
MBD4O95243 AC009296.1-201ENST00000443146 155 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AP000936.2-201ENST00000447151 681 ntBASIC3.26□□□□□ -1.89
MBD4O95243 DPPA3P1-201ENST00000448050 469 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AC116562.3-201ENST00000506136 177 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AC010424.1-201ENST00000506336 297 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.26□□□□□ -1.89
MBD4O95243 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.26□□□□□ -1.89
MBD4O95243 MTCO3P28-201ENST00000513351 515 ntBASIC3.26□□□□□ -1.89
MBD4O95243 RNU6-1183P-201ENST00000517054 60 ntBASIC3.26□□□□□ -1.89
MBD4O95243 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.26□□□□□ -1.89
MBD4O95243 AC068587.5-201ENST00000528506 175 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.26□□□□□ -1.89
MBD4O95243 GLYCAM1-201ENST00000546596 285 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AC021739.1-201ENST00000559631 174 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AC098848.2-201ENST00000588023 330 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AC068790.2-201ENST00000602601 557 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AC006023.1-201ENST00000603944 259 ntBASIC3.26□□□□□ -1.89
MBD4O95243 AC019159.1-201ENST00000605094 187 ntBASIC3.26□□□□□ -1.89
MBD4O95243 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.26□□□□□ -1.89
MBD4O95243 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.26□□□□□ -1.89
MBD4O95243 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
MBD4O95243 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MBD4O95243 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MBD4O95243 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.25□□□□□ -1.89
MBD4O95243 MIR9-1-201ENST00000385198 89 ntBASIC3.25□□□□□ -1.89
MBD4O95243 USP9YP6-201ENST00000413550 854 ntBASIC3.25□□□□□ -1.89
MBD4O95243 AC133104.1-201ENST00000429100 218 ntBASIC3.25□□□□□ -1.89
MBD4O95243 MTCO2P16-201ENST00000436962 677 ntBASIC3.25□□□□□ -1.89
MBD4O95243 RPL21P2-201ENST00000440049 481 ntBASIC3.25□□□□□ -1.89
MBD4O95243 OSTCP8-201ENST00000445117 448 ntBASIC3.25□□□□□ -1.89
MBD4O95243 AL109933.2-201ENST00000452651 260 ntBASIC3.25□□□□□ -1.89
MBD4O95243 KLF3P2-201ENST00000465138 268 ntBASIC3.25□□□□□ -1.89
MBD4O95243 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.25□□□□□ -1.89
MBD4O95243 TRBV1-201ENST00000476502 284 ntBASIC3.25□□□□□ -1.89
MBD4O95243 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD4O95243 AC098591.2-201ENST00000510152 315 ntBASIC3.25□□□□□ -1.89
MBD4O95243 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
MBD4O95243 RNU6-572P-201ENST00000516724 80 ntBASIC3.25□□□□□ -1.89
MBD4O95243 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
MBD4O95243 AC025755.1-201ENST00000521306 278 ntBASIC3.25□□□□□ -1.89
MBD4O95243 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.25□□□□□ -1.89
MBD4O95243 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD4O95243 AC006199.1-201ENST00000548728 219 ntBASIC3.25□□□□□ -1.89
MBD4O95243 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD4O95243 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD4O95243 AC007151.1-201ENST00000572774 483 ntBASIC3.25□□□□□ -1.89
MBD4O95243 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
MBD4O95243 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD4O95243 MIR4672-201ENST00000583126 81 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms