Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CNOT3O75175 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.39□□□□□ -1.87
CNOT3O75175 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNOT3O75175 Y_RNA.301-201ENST00000364990 103 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 Y_RNA.326-201ENST00000365176 113 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.39□□□□□ -1.87
CNOT3O75175 RNVU1-14-201ENST00000384770 164 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 CISD1P1-201ENST00000393907 327 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 AL139039.1-201ENST00000401900 692 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 SNORA11.1-201ENST00000408133 129 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.39□□□□□ -1.87
CNOT3O75175 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.39□□□□□ -1.87
CNOT3O75175 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.39□□□□□ -1.87
CNOT3O75175 AC090774.1-201ENST00000435925 246 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.39□□□□□ -1.87
CNOT3O75175 MTND4P19-201ENST00000446659 478 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 RNU7-66P-201ENST00000459469 62 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 AC008155.2-201ENST00000464337 397 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 VN1R17P-201ENST00000472048 1090 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.39□□□□□ -1.87
CNOT3O75175 TRBVA-201ENST00000498804 316 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.39□□□□□ -1.87
CNOT3O75175 KLHL2P1-201ENST00000508691 521 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 RNU6-1170P-201ENST00000515974 106 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.39□□□□□ -1.87
CNOT3O75175 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.39□□□□□ -1.87
CNOT3O75175 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.39□□□□□ -1.87
CNOT3O75175 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.39□□□□□ -1.87
CNOT3O75175 OR4H12P-201ENST00000556269 907 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 MIR4790-201ENST00000577799 79 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.39□□□□□ -1.87
CNOT3O75175 AC022432.1-201ENST00000595739 310 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 DPPA3P3-201ENST00000603842 430 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 ATP1B3P1-201ENST00000605365 821 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 AC004696.1-201ENST00000614345 607 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 AC084781.2-201ENST00000615568 161 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 AL079305.1-201ENST00000623159 3008 ntBASIC3.39□□□□□ -1.87
CNOT3O75175 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNOT3O75175 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNOT3O75175 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNOT3O75175 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CNOT3O75175 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNOT3O75175 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CNOT3O75175 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CNOT3O75175 AL049781.1-201ENST00000623195 3585 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CNOT3O75175 RNU6-288P-201ENST00000363690 104 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 Y_RNA.315-201ENST00000365117 102 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 RNA5SP235-201ENST00000365411 114 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 DYNLT3P1-201ENST00000378574 347 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 Y_RNA.579-201ENST00000390939 94 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AL583834.1-201ENST00000406943 343 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC126124.2-201ENST00000413542 321 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 RPS7P15-201ENST00000415804 584 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 RPL23AP69-201ENST00000431134 458 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 RPL21P112-201ENST00000434403 463 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.38□□□□□ -1.87
CNOT3O75175 NDUFA5P4-201ENST00000436704 385 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 RPL23AP22-201ENST00000437556 453 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC009969.1-201ENST00000438726 172 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 RPS15AP27-201ENST00000449183 343 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.38□□□□□ -1.87
CNOT3O75175 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.38□□□□□ -1.87
CNOT3O75175 RBMY2UP-201ENST00000453474 324 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 RPS4XP2-201ENST00000458402 793 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.38□□□□□ -1.87
CNOT3O75175 HIGD1AP13-201ENST00000509878 289 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC098591.2-201ENST00000510152 315 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.38□□□□□ -1.87
CNOT3O75175 GMPSP1-201ENST00000514075 579 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 RNU6-189P-201ENST00000516120 101 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 Y_RNA.689-201ENST00000516589 107 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 RNU6-1088P-201ENST00000516850 104 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 SNORA25.17-201ENST00000517184 124 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AP000889.2-201ENST00000532684 490 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.38□□□□□ -1.87
CNOT3O75175 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.38□□□□□ -1.87
CNOT3O75175 AL121603.1-201ENST00000553815 142 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC093249.1-201ENST00000567049 203 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.38□□□□□ -1.87
CNOT3O75175 SNORD84-203ENST00000584275 78 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 POLR3GP2-201ENST00000588366 668 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AL161756.2-201ENST00000604597 246 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC007619.2-201ENST00000605743 379 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 U2.17-201ENST00000611454 95 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 SDR42E1P2-201ENST00000614861 481 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNOT3O75175 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CNOT3O75175 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.38□□□□□ -1.87
CNOT3O75175 AC007998.5-201ENST00000622938 237 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AL359757.2-201ENST00000624309 274 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CNOT3O75175 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNOT3O75175 AC073073.2-201ENST00000609827 2578 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.38□□□□□ -1.87
CNOT3O75175 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNOT3O75175 MTND4P27-201ENST00000450813 1354 ntBASIC3.38□□□□□ -1.87
CNOT3O75175 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms