Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.66□□□□□ -1.82
PROM1O43490 ZNF519P1-201ENST00000449011 1626 ntBASIC3.66□□□□□ -1.82
PROM1O43490 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.65□□□□□ -1.83
PROM1O43490 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PROM1O43490 RNU6-562P-201ENST00000362731 107 ntBASIC3.65□□□□□ -1.83
PROM1O43490 Y_RNA.187-201ENST00000363918 113 ntBASIC3.65□□□□□ -1.83
PROM1O43490 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PROM1O43490 Y_RNA.399-201ENST00000383955 105 ntBASIC3.65□□□□□ -1.83
PROM1O43490 Y_RNA.422-201ENST00000384054 114 ntBASIC3.65□□□□□ -1.83
PROM1O43490 Y_RNA.482-201ENST00000384377 111 ntBASIC3.65□□□□□ -1.83
PROM1O43490 RNU6-14P-201ENST00000384630 106 ntBASIC3.65□□□□□ -1.83
PROM1O43490 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.65□□□□□ -1.83
PROM1O43490 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.65□□□□□ -1.83
PROM1O43490 AC080125.1-201ENST00000414888 684 ntBASIC3.65□□□□□ -1.83
PROM1O43490 AL160275.3-201ENST00000423876 471 ntBASIC3.65□□□□□ -1.83
PROM1O43490 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.65□□□□□ -1.83
PROM1O43490 AL591704.1-201ENST00000432574 275 ntBASIC3.65□□□□□ -1.83
PROM1O43490 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.65□□□□□ -1.83
PROM1O43490 SNAP23P1-201ENST00000433229 246 ntBASIC3.65□□□□□ -1.83
PROM1O43490 RPL32P28-201ENST00000443577 397 ntBASIC3.65□□□□□ -1.83
PROM1O43490 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.65□□□□□ -1.83
PROM1O43490 MTND1P17-201ENST00000448961 204 ntBASIC3.65□□□□□ -1.83
PROM1O43490 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.65□□□□□ -1.83
PROM1O43490 AL163540.1-201ENST00000485382 386 ntBASIC3.65□□□□□ -1.83
PROM1O43490 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.65□□□□□ -1.83
PROM1O43490 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.65□□□□□ -1.83
PROM1O43490 RNU6-1332P-201ENST00000516666 104 ntBASIC3.65□□□□□ -1.83
PROM1O43490 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PROM1O43490 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.65□□□□□ -1.83
PROM1O43490 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.65□□□□□ -1.83
PROM1O43490 AC090877.1-201ENST00000561418 344 ntBASIC3.65□□□□□ -1.83
PROM1O43490 MIR5685-201ENST00000579080 79 ntBASIC3.65□□□□□ -1.83
PROM1O43490 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.65□□□□□ -1.83
PROM1O43490 BDH2P1-201ENST00000602288 736 ntBASIC3.65□□□□□ -1.83
PROM1O43490 AL161756.2-201ENST00000604597 246 ntBASIC3.65□□□□□ -1.83
PROM1O43490 AP001836.1-201ENST00000604675 523 ntBASIC3.65□□□□□ -1.83
PROM1O43490 AL355810.1-201ENST00000614629 552 ntBASIC3.65□□□□□ -1.83
PROM1O43490 PLCE1P1-201ENST00000622094 305 ntBASIC3.65□□□□□ -1.83
PROM1O43490 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PROM1O43490 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
PROM1O43490 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PROM1O43490 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
PROM1O43490 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PROM1O43490 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PROM1O43490 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
PROM1O43490 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PROM1O43490 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PROM1O43490 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
PROM1O43490 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PROM1O43490 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PROM1O43490 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.64□□□□□ -1.83
PROM1O43490 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PROM1O43490 RNU5A-1-201ENST00000362698 116 ntBASIC3.64□□□□□ -1.83
PROM1O43490 RNU6-1188P-201ENST00000363795 107 ntBASIC3.64□□□□□ -1.83
PROM1O43490 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.64□□□□□ -1.83
PROM1O43490 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PROM1O43490 RNU6-738P-201ENST00000384531 106 ntBASIC3.64□□□□□ -1.83
PROM1O43490 MIR7-3-201ENST00000384898 110 ntBASIC3.64□□□□□ -1.83
PROM1O43490 RNU6-308P-201ENST00000390957 107 ntBASIC3.64□□□□□ -1.83
PROM1O43490 RNU6-817P-201ENST00000391083 104 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.64□□□□□ -1.83
PROM1O43490 SKA2P1-201ENST00000425592 390 ntBASIC3.64□□□□□ -1.83
PROM1O43490 MTATP6P4-201ENST00000427725 675 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AL669831.1-202ENST00000428504 417 ntBASIC3.64□□□□□ -1.83
PROM1O43490 HMGN2P20-201ENST00000437531 273 ntBASIC3.64□□□□□ -1.83
PROM1O43490 RPL26P6-201ENST00000440913 438 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AL500522.2-201ENST00000448562 343 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.64□□□□□ -1.83
PROM1O43490 RNU7-152P-201ENST00000458982 64 ntBASIC3.64□□□□□ -1.83
PROM1O43490 RNU7-170P-201ENST00000459303 61 ntBASIC3.64□□□□□ -1.83
PROM1O43490 RPL7P49-201ENST00000471402 708 ntBASIC3.64□□□□□ -1.83
PROM1O43490 MLLT10P2-201ENST00000506434 249 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.64□□□□□ -1.83
PROM1O43490 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.64□□□□□ -1.83
PROM1O43490 Y_RNA.711-201ENST00000516993 102 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.64□□□□□ -1.83
PROM1O43490 AL355836.1-201ENST00000555951 870 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
PROM1O43490 CYP2C61P-201ENST00000604072 290 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AP000942.4-201ENST00000604811 241 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AC116312.1-201ENST00000606841 314 ntBASIC3.64□□□□□ -1.83
PROM1O43490 FAM157A-202ENST00000615155 405 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AC133104.2-201ENST00000615272 193 ntBASIC3.64□□□□□ -1.83
PROM1O43490 MIR6128-201ENST00000615528 109 ntBASIC3.64□□□□□ -1.83
PROM1O43490 ATP5A1P2-202ENST00000616464 443 ntBASIC3.64□□□□□ -1.83
PROM1O43490 AC010378.1-201ENST00000619270 362 ntBASIC3.64□□□□□ -1.83
PROM1O43490 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.64□□□□□ -1.83
PROM1O43490 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PROM1O43490 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PROM1O43490 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PROM1O43490 AC007823.1-201ENST00000569932 1566 ntBASIC3.63□□□□□ -1.83
PROM1O43490 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PROM1O43490 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PROM1O43490 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PROM1O43490 Y_RNA.197-201ENST00000364004 102 ntBASIC3.63□□□□□ -1.83
PROM1O43490 RNU6-173P-201ENST00000364215 104 ntBASIC3.63□□□□□ -1.83
PROM1O43490 SNORA63C-201ENST00000364578 129 ntBASIC3.63□□□□□ -1.83
PROM1O43490 SNORA33.2-201ENST00000365413 134 ntBASIC3.63□□□□□ -1.83
PROM1O43490 RNU6-1160P-201ENST00000384546 104 ntBASIC3.63□□□□□ -1.83
PROM1O43490 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms