Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.56□□□□□ -2
PHF1O43189 RPL23AP30-201ENST00000432419 501 ntBASIC2.56□□□□□ -2
PHF1O43189 RPS20P5-201ENST00000434808 360 ntBASIC2.56□□□□□ -2
PHF1O43189 RPL21P2-201ENST00000440049 481 ntBASIC2.56□□□□□ -2
PHF1O43189 MTATP6P30-201ENST00000443540 664 ntBASIC2.56□□□□□ -2
PHF1O43189 RPL23AP20-201ENST00000447965 421 ntBASIC2.56□□□□□ -2
PHF1O43189 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.56□□□□□ -2
PHF1O43189 AL590639.1-201ENST00000456484 337 ntBASIC2.56□□□□□ -2
PHF1O43189 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.56□□□□□ -2
PHF1O43189 AC022364.2-201ENST00000457963 554 ntBASIC2.56□□□□□ -2
PHF1O43189 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.56□□□□□ -2
PHF1O43189 RPL30P14-201ENST00000482744 348 ntBASIC2.56□□□□□ -2
PHF1O43189 RN7SL633P-201ENST00000488974 297 ntBASIC2.56□□□□□ -2
PHF1O43189 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.56□□□□□ -2
PHF1O43189 AC009646.1-201ENST00000510455 318 ntBASIC2.56□□□□□ -2
PHF1O43189 AL117351.2-201ENST00000513571 157 ntBASIC2.56□□□□□ -2
PHF1O43189 RNU7-51P-201ENST00000516560 62 ntBASIC2.56□□□□□ -2
PHF1O43189 RN7SKP258-201ENST00000517151 304 ntBASIC2.56□□□□□ -2
PHF1O43189 NRON-201ENST00000517270 370 ntBASIC2.56□□□□□ -2
PHF1O43189 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.56□□□□□ -2
PHF1O43189 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.56□□□□□ -2
PHF1O43189 AK6P1-201ENST00000540219 478 ntBASIC2.56□□□□□ -2
PHF1O43189 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.56□□□□□ -2
PHF1O43189 AL512310.1-201ENST00000548639 172 ntBASIC2.56□□□□□ -2
PHF1O43189 HMGB1P33-201ENST00000563485 527 ntBASIC2.56□□□□□ -2
PHF1O43189 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.56□□□□□ -2
PHF1O43189 HMGB1P6-201ENST00000569046 646 ntBASIC2.56□□□□□ -2
PHF1O43189 MIR3921-201ENST00000577308 85 ntBASIC2.56□□□□□ -2
PHF1O43189 AF038458.1-201ENST00000588406 262 ntBASIC2.56□□□□□ -2
PHF1O43189 AC025449.1-201ENST00000603896 529 ntBASIC2.56□□□□□ -2
PHF1O43189 U6atac.1-201ENST00000616025 117 ntBASIC2.56□□□□□ -2
PHF1O43189 AL138880.2-201ENST00000616214 239 ntBASIC2.56□□□□□ -2
PHF1O43189 SEPT14P19-203ENST00000633205 211 ntBASIC2.56□□□□□ -2
PHF1O43189 MAPK10-266ENST00000641066 6555 ntBASIC2.56□□□□□ -2
PHF1O43189 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
PHF1O43189 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PHF1O43189 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
PHF1O43189 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.55□□□□□ -2
PHF1O43189 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PHF1O43189 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PHF1O43189 MIR22-201ENST00000362190 85 ntBASIC2.55□□□□□ -2
PHF1O43189 SNORA1.3-201ENST00000384676 136 ntBASIC2.55□□□□□ -2
PHF1O43189 RNU6-606P-201ENST00000384721 111 ntBASIC2.55□□□□□ -2
PHF1O43189 RNU6-780P-201ENST00000391030 104 ntBASIC2.55□□□□□ -2
PHF1O43189 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.55□□□□□ -2
PHF1O43189 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.55□□□□□ -2
PHF1O43189 NDUFB4P7-201ENST00000423198 363 ntBASIC2.55□□□□□ -2
PHF1O43189 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.55□□□□□ -2
PHF1O43189 AC000111.3-201ENST00000433478 193 ntBASIC2.55□□□□□ -2
PHF1O43189 MTATP6P13-201ENST00000438531 667 ntBASIC2.55□□□□□ -2
PHF1O43189 AC105272.1-201ENST00000438604 198 ntBASIC2.55□□□□□ -2
PHF1O43189 AC010095.1-201ENST00000443543 144 ntBASIC2.55□□□□□ -2
PHF1O43189 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.55□□□□□ -2
PHF1O43189 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.55□□□□□ -2
PHF1O43189 AL356010.1-201ENST00000456364 102 ntBASIC2.55□□□□□ -2
PHF1O43189 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.55□□□□□ -2
PHF1O43189 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.55□□□□□ -2
PHF1O43189 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.55□□□□□ -2
PHF1O43189 Y_RNA.693-201ENST00000516641 110 ntBASIC2.55□□□□□ -2
PHF1O43189 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.55□□□□□ -2
PHF1O43189 AC104383.1-201ENST00000530297 370 ntBASIC2.55□□□□□ -2
PHF1O43189 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.55□□□□□ -2
PHF1O43189 AC093012.1-202ENST00000549403 582 ntBASIC2.55□□□□□ -2
PHF1O43189 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.55□□□□□ -2
PHF1O43189 AL157687.1-201ENST00000554853 619 ntBASIC2.55□□□□□ -2
PHF1O43189 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.55□□□□□ -2
PHF1O43189 AC024619.4-201ENST00000580924 316 ntBASIC2.55□□□□□ -2
PHF1O43189 AC098848.2-201ENST00000588023 330 ntBASIC2.55□□□□□ -2
PHF1O43189 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
PHF1O43189 AL670379.6-201ENST00000603753 252 ntBASIC2.55□□□□□ -2
PHF1O43189 AL670379.11-201ENST00000604059 253 ntBASIC2.55□□□□□ -2
PHF1O43189 AC008162.1-201ENST00000604718 254 ntBASIC2.55□□□□□ -2
PHF1O43189 AC007363.1-201ENST00000604736 620 ntBASIC2.55□□□□□ -2
PHF1O43189 AL670379.1-201ENST00000604752 252 ntBASIC2.55□□□□□ -2
PHF1O43189 AL670379.5-201ENST00000605253 252 ntBASIC2.55□□□□□ -2
PHF1O43189 AL670379.12-201ENST00000605291 253 ntBASIC2.55□□□□□ -2
PHF1O43189 AL670379.8-201ENST00000605353 252 ntBASIC2.55□□□□□ -2
PHF1O43189 AL670379.7-201ENST00000605823 252 ntBASIC2.55□□□□□ -2
PHF1O43189 AL121992.2-201ENST00000606262 256 ntBASIC2.55□□□□□ -2
PHF1O43189 SDR42E1P2-201ENST00000614861 481 ntBASIC2.55□□□□□ -2
PHF1O43189 AC010133.1-201ENST00000615809 842 ntBASIC2.55□□□□□ -2
PHF1O43189 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.55□□□□□ -2
PHF1O43189 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.55□□□□□ -2
PHF1O43189 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.55□□□□□ -2
PHF1O43189 AL160394.1-201ENST00000624765 724 ntBASIC2.55□□□□□ -2
PHF1O43189 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.55□□□□□ -2
PHF1O43189 MIR622-201ENST00000638396 96 ntBASIC2.55□□□□□ -2
PHF1O43189 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PHF1O43189 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.54□□□□□ -2
PHF1O43189 AC073343.1-201ENST00000328239 651 ntBASIC2.54□□□□□ -2
PHF1O43189 RNY4P14-201ENST00000363656 96 ntBASIC2.54□□□□□ -2
PHF1O43189 SMIM11P1-201ENST00000369586 178 ntBASIC2.54□□□□□ -2
PHF1O43189 RNU6-456P-201ENST00000384493 107 ntBASIC2.54□□□□□ -2
PHF1O43189 RNU6-14P-201ENST00000384630 106 ntBASIC2.54□□□□□ -2
PHF1O43189 MIR1-2-201ENST00000384961 85 ntBASIC2.54□□□□□ -2
PHF1O43189 MIR514A1-201ENST00000385133 98 ntBASIC2.54□□□□□ -2
PHF1O43189 AL451054.2-201ENST00000420896 202 ntBASIC2.54□□□□□ -2
PHF1O43189 NUP35P1-201ENST00000422734 947 ntBASIC2.54□□□□□ -2
PHF1O43189 FCF1P1-201ENST00000432690 571 ntBASIC2.54□□□□□ -2
PHF1O43189 MTATP6P16-201ENST00000434543 526 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms