Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC026464.5-201ENST00000562497 722 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PHGDHO43175 MIR3160-1-201ENST00000577972 85 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 MIR4782-201ENST00000577987 79 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AC091135.1-201ENST00000585943 307 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.58□□□□□ -1.84
PHGDHO43175 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 uc_338.5-201ENST00000611839 155 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 RMST_4.1-201ENST00000616886 107 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PHGDHO43175 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.58□□□□□ -1.84
PHGDHO43175 U2.21-201ENST00000637295 81 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PHGDHO43175 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 AC106871.1-201ENST00000568324 3102 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.58□□□□□ -1.84
PHGDHO43175 AC005183.1-201ENST00000603687 1979 ntBASIC3.58□□□□□ -1.84
PHGDHO43175 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PHGDHO43175 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.57□□□□□ -1.84
PHGDHO43175 FRG1CP-201ENST00000358464 769 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 RNU6-778P-201ENST00000363269 103 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 RNU6-254P-201ENST00000363377 107 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 Y_RNA.324-201ENST00000365165 102 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 RNU1-73P-201ENST00000383971 164 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 RNU6-1013P-201ENST00000384180 107 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 MIR450B-201ENST00000401182 78 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AL356967.1-201ENST00000406305 431 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.57□□□□□ -1.84
PHGDHO43175 SKA2P1-201ENST00000425592 390 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 TOMM20P4-201ENST00000427861 435 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AL158071.1-201ENST00000430315 461 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AL627311.1-201ENST00000431514 115 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.57□□□□□ -1.84
PHGDHO43175 AC092001.1-201ENST00000453012 261 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.57□□□□□ -1.84
PHGDHO43175 AL133162.1-201ENST00000463228 453 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AC011005.2-201ENST00000487324 359 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 SNORA70.14-201ENST00000516205 110 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 RNU6-273P-201ENST00000516937 96 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 RNU6-703P-201ENST00000516946 107 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 SNORA25.17-201ENST00000517184 124 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
PHGDHO43175 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.57□□□□□ -1.84
PHGDHO43175 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.57□□□□□ -1.84
PHGDHO43175 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.57□□□□□ -1.84
PHGDHO43175 MIR3942-201ENST00000585264 109 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 MIR5692C1-201ENST00000585309 91 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.57□□□□□ -1.84
PHGDHO43175 NUTF2P8-201ENST00000604593 363 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 MTND4LP5-201ENST00000605152 292 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AL138880.2-201ENST00000616214 239 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 AL359314.1-201ENST00000616913 261 ntBASIC3.57□□□□□ -1.84
PHGDHO43175 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.57□□□□□ -1.84
PHGDHO43175 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.57□□□□□ -1.84
PHGDHO43175 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.57□□□□□ -1.84
PHGDHO43175 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.56□□□□□ -1.84
PHGDHO43175 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
PHGDHO43175 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
PHGDHO43175 Y_RNA.142-201ENST00000363491 102 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 RNU6-384P-201ENST00000364900 104 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 SNORD6-201ENST00000365444 73 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 MIR10A-201ENST00000385043 110 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 SNORA57.1-201ENST00000391227 145 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 RN7SKP156-201ENST00000410308 342 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 PGBD4P6-201ENST00000421501 610 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.56□□□□□ -1.84
PHGDHO43175 AC005019.1-201ENST00000436455 431 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 MRPS31P2-201ENST00000451581 518 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 MTATP6P7-201ENST00000453315 681 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.56□□□□□ -1.84
PHGDHO43175 AC010099.1-201ENST00000455434 375 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 RPL26P9-201ENST00000457466 433 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.56□□□□□ -1.84
PHGDHO43175 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.56□□□□□ -1.84
PHGDHO43175 RNU6-864P-201ENST00000516256 108 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 RNU6-256P-201ENST00000516747 97 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 AP006245.1-201ENST00000522549 120 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 AC037471.2-201ENST00000564941 598 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 MIR5187-201ENST00000583479 76 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 AC005261.5-201ENST00000596280 355 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 VN1R85P-201ENST00000601587 426 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 AL645944.1-201ENST00000603857 493 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 AC099654.5-201ENST00000636479 350 ntBASIC3.56□□□□□ -1.84
PHGDHO43175 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PHGDHO43175 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PHGDHO43175 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
PHGDHO43175 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PHGDHO43175 AC068647.1-201ENST00000489539 2265 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PHGDHO43175 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PHGDHO43175 RNU6-797P-201ENST00000363101 109 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.55□□□□□ -1.84
PHGDHO43175 RPL5P18-201ENST00000406671 891 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 MIR1193-201ENST00000408109 78 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 NDUFS5P4-201ENST00000412983 318 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 MTND3P23-201ENST00000431980 347 ntBASIC3.55□□□□□ -1.84
PHGDHO43175 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.55□□□□□ -1.84
PHGDHO43175 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.55□□□□□ -1.84
PHGDHO43175 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms