Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MIR122-201ENST00000385044 85 ntBASIC2.05□□□□□ -2.08
LSM1O15116 RNU6-1176P-201ENST00000390955 107 ntBASIC2.05□□□□□ -2.08
LSM1O15116 RNU6-1242P-201ENST00000391052 103 ntBASIC2.05□□□□□ -2.08
LSM1O15116 BTF3P7-201ENST00000407097 488 ntBASIC2.05□□□□□ -2.08
LSM1O15116 ELOCP9-201ENST00000418624 239 ntBASIC2.05□□□□□ -2.08
LSM1O15116 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.05□□□□□ -2.08
LSM1O15116 RPL23AP7-203ENST00000449021 469 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AC092001.1-201ENST00000453012 261 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.05□□□□□ -2.08
LSM1O15116 AC055731.1-201ENST00000474387 401 ntBASIC2.05□□□□□ -2.08
LSM1O15116 RPL23AP41-201ENST00000484754 458 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AC109486.1-201ENST00000486833 374 ntBASIC2.05□□□□□ -2.08
LSM1O15116 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.05□□□□□ -2.08
LSM1O15116 MTCYBP43-201ENST00000513621 740 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AC112206.4-201ENST00000515142 405 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.05□□□□□ -2.08
LSM1O15116 AC068587.4-201ENST00000533893 186 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM1O15116 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.05□□□□□ -2.08
LSM1O15116 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.05□□□□□ -2.08
LSM1O15116 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.05□□□□□ -2.08
LSM1O15116 BNIP3P23-201ENST00000599655 511 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AL391001.1-201ENST00000602747 715 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AL138963.2-201ENST00000605137 226 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AC068276.1-201ENST00000605793 379 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AL627230.6-201ENST00000611129 280 ntBASIC2.05□□□□□ -2.08
LSM1O15116 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.05□□□□□ -2.08
LSM1O15116 MIR518D-201ENST00000385014 87 ntBASIC2.04□□□□□ -2.08
LSM1O15116 MIR95-201ENST00000385072 81 ntBASIC2.04□□□□□ -2.08
LSM1O15116 MIR147B-201ENST00000390185 80 ntBASIC2.04□□□□□ -2.08
LSM1O15116 RNU6-817P-201ENST00000391083 104 ntBASIC2.04□□□□□ -2.08
LSM1O15116 AC078974.1-201ENST00000411597 223 ntBASIC2.04□□□□□ -2.08
LSM1O15116 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM1O15116 RPL7P34-201ENST00000433316 712 ntBASIC2.04□□□□□ -2.08
LSM1O15116 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.04□□□□□ -2.08
LSM1O15116 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.04□□□□□ -2.08
LSM1O15116 UBE2D3P1-201ENST00000436669 444 ntBASIC2.04□□□□□ -2.08
LSM1O15116 HIGD1AP2-201ENST00000446367 280 ntBASIC2.04□□□□□ -2.08
LSM1O15116 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
LSM1O15116 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.04□□□□□ -2.08
LSM1O15116 snoU109.3-201ENST00000459477 145 ntBASIC2.04□□□□□ -2.08
LSM1O15116 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
LSM1O15116 RPL39P36-201ENST00000490784 156 ntBASIC2.04□□□□□ -2.08
LSM1O15116 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
LSM1O15116 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
LSM1O15116 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.04□□□□□ -2.08
LSM1O15116 AC118273.2-201ENST00000532092 465 ntBASIC2.04□□□□□ -2.08
LSM1O15116 AC079598.5-201ENST00000547460 117 ntBASIC2.04□□□□□ -2.08
LSM1O15116 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM1O15116 MTCYBP23-201ENST00000558717 1102 ntBASIC2.04□□□□□ -2.08
LSM1O15116 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
LSM1O15116 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LSM1O15116 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
LSM1O15116 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LSM1O15116 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LSM1O15116 AC119751.3-201ENST00000399720 670 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AL355143.1-201ENST00000407101 841 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AL353621.1-201ENST00000418219 243 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.03□□□□□ -2.08
LSM1O15116 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.03□□□□□ -2.08
LSM1O15116 AL451074.3-201ENST00000437709 472 ntBASIC2.03□□□□□ -2.08
LSM1O15116 MTND3P1-201ENST00000441336 220 ntBASIC2.03□□□□□ -2.08
LSM1O15116 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LSM1O15116 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.03□□□□□ -2.08
LSM1O15116 PMCHL2-203ENST00000457791 237 ntBASIC2.03□□□□□ -2.08
LSM1O15116 RPL37P6-201ENST00000460682 294 ntBASIC2.03□□□□□ -2.08
LSM1O15116 RPL7P43-201ENST00000478876 753 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM1O15116 MRPS17P9-201ENST00000511924 393 ntBASIC2.03□□□□□ -2.08
LSM1O15116 SMURF2P1-201ENST00000514992 481 ntBASIC2.03□□□□□ -2.08
LSM1O15116 RNU2-19P-201ENST00000517288 84 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.03□□□□□ -2.08
LSM1O15116 MTCYBP22-201ENST00000603788 447 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AC007363.1-201ENST00000604736 620 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.03□□□□□ -2.08
LSM1O15116 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
LSM1O15116 DUXAP9-208ENST00000622815 614 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AL356596.1-201ENST00000624230 379 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AC091965.5-201ENST00000624785 342 ntBASIC2.03□□□□□ -2.08
LSM1O15116 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.03□□□□□ -2.08
LSM1O15116 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
LSM1O15116 Z75746.1-201ENST00000440243 2080 ntBASIC2.02□□□□□ -2.09
LSM1O15116 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.02□□□□□ -2.09
LSM1O15116 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
LSM1O15116 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.02□□□□□ -2.09
LSM1O15116 RNU6-701P-201ENST00000384059 107 ntBASIC2.02□□□□□ -2.09
LSM1O15116 Y_RNA.534-201ENST00000384599 112 ntBASIC2.02□□□□□ -2.09
LSM1O15116 RPS24P7-201ENST00000416921 246 ntBASIC2.02□□□□□ -2.09
LSM1O15116 VPS26BP1-201ENST00000417155 755 ntBASIC2.02□□□□□ -2.09
LSM1O15116 AC097463.2-201ENST00000421074 142 ntBASIC2.02□□□□□ -2.09
LSM1O15116 AL592045.1-201ENST00000429867 352 ntBASIC2.02□□□□□ -2.09
LSM1O15116 HMGB1P27-201ENST00000431429 603 ntBASIC2.02□□□□□ -2.09
LSM1O15116 TIMM9P1-201ENST00000436122 256 ntBASIC2.02□□□□□ -2.09
LSM1O15116 AC108059.3-201ENST00000456388 214 ntBASIC2.02□□□□□ -2.09
LSM1O15116 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.02□□□□□ -2.09
LSM1O15116 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
LSM1O15116 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
LSM1O15116 ACA59.2-201ENST00000517061 156 ntBASIC2.02□□□□□ -2.09
LSM1O15116 AP000907.2-201ENST00000530827 353 ntBASIC2.02□□□□□ -2.09
LSM1O15116 SNRPGP18-201ENST00000553000 214 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms