Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.79□□□□□ -1.8
APAF1O14727 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.79□□□□□ -1.8
APAF1O14727 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.79□□□□□ -1.8
APAF1O14727 RPL21P8-201ENST00000465083 535 ntBASIC3.79□□□□□ -1.8
APAF1O14727 EIF4EP3-201ENST00000498782 656 ntBASIC3.79□□□□□ -1.8
APAF1O14727 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
APAF1O14727 SNORA40.12-201ENST00000516329 111 ntBASIC3.79□□□□□ -1.8
APAF1O14727 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.79□□□□□ -1.8
APAF1O14727 AP000867.2-201ENST00000532468 320 ntBASIC3.79□□□□□ -1.8
APAF1O14727 AL157687.1-201ENST00000554853 619 ntBASIC3.79□□□□□ -1.8
APAF1O14727 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.79□□□□□ -1.8
APAF1O14727 TPRKBP2-201ENST00000565969 475 ntBASIC3.79□□□□□ -1.8
APAF1O14727 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.79□□□□□ -1.8
APAF1O14727 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.79□□□□□ -1.8
APAF1O14727 AP003465.2-201ENST00000602571 373 ntBASIC3.79□□□□□ -1.8
APAF1O14727 DEFB131E-202ENST00000602581 683 ntBASIC3.79□□□□□ -1.8
APAF1O14727 AC007621.1-201ENST00000604544 437 ntBASIC3.79□□□□□ -1.8
APAF1O14727 Z99571.1-201ENST00000636677 394 ntBASIC3.79□□□□□ -1.8
APAF1O14727 AC068137.3-201ENST00000639191 341 ntBASIC3.79□□□□□ -1.8
APAF1O14727 AC073869.6-201ENST00000640656 341 ntBASIC3.79□□□□□ -1.8
APAF1O14727 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
APAF1O14727 AC027514.1-201ENST00000588561 1603 ntBASIC3.79□□□□□ -1.8
APAF1O14727 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
APAF1O14727 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.79□□□□□ -1.8
APAF1O14727 MTND5P19-201ENST00000424872 1794 ntBASIC3.79□□□□□ -1.8
APAF1O14727 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APAF1O14727 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APAF1O14727 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APAF1O14727 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.78□□□□□ -1.8
APAF1O14727 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.78□□□□□ -1.8
APAF1O14727 RNU6-270P-201ENST00000364131 105 ntBASIC3.78□□□□□ -1.8
APAF1O14727 Y_RNA.372-201ENST00000365599 102 ntBASIC3.78□□□□□ -1.8
APAF1O14727 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
APAF1O14727 CALM2P3-201ENST00000400429 449 ntBASIC3.78□□□□□ -1.8
APAF1O14727 RN7SKP58-201ENST00000411010 305 ntBASIC3.78□□□□□ -1.8
APAF1O14727 RPL26P27-201ENST00000414397 437 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AC092809.3-201ENST00000415453 231 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.78□□□□□ -1.8
APAF1O14727 AC099548.1-201ENST00000421443 426 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AL353193.1-201ENST00000421444 268 ntBASIC3.78□□□□□ -1.8
APAF1O14727 HMGN2P30-201ENST00000423237 256 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AL160275.3-201ENST00000423876 471 ntBASIC3.78□□□□□ -1.8
APAF1O14727 HMGB1P9-201ENST00000429856 646 ntBASIC3.78□□□□□ -1.8
APAF1O14727 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.78□□□□□ -1.8
APAF1O14727 AC010099.1-201ENST00000455434 375 ntBASIC3.78□□□□□ -1.8
APAF1O14727 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.78□□□□□ -1.8
APAF1O14727 AP002884.2-201ENST00000471647 395 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AL163973.1-201ENST00000484753 577 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.78□□□□□ -1.8
APAF1O14727 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.78□□□□□ -1.8
APAF1O14727 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.78□□□□□ -1.8
APAF1O14727 AC117522.3-201ENST00000507974 584 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.78□□□□□ -1.8
APAF1O14727 AP003122.3-201ENST00000526316 255 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AC084851.1-201ENST00000529105 249 ntBASIC3.78□□□□□ -1.8
APAF1O14727 NACAP3-201ENST00000552100 481 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AL512360.1-201ENST00000555346 234 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.78□□□□□ -1.8
APAF1O14727 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.78□□□□□ -1.8
APAF1O14727 AC025678.1-201ENST00000567861 338 ntBASIC3.78□□□□□ -1.8
APAF1O14727 MIR4703-201ENST00000577728 79 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AL451007.1-201ENST00000595491 289 ntBASIC3.78□□□□□ -1.8
APAF1O14727 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.78□□□□□ -1.8
APAF1O14727 AL020991.1-201ENST00000612314 373 ntBASIC3.78□□□□□ -1.8
APAF1O14727 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.78□□□□□ -1.8
APAF1O14727 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.78□□□□□ -1.8
APAF1O14727 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
APAF1O14727 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
APAF1O14727 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.78□□□□□ -1.8
APAF1O14727 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
APAF1O14727 AL021368.2-201ENST00000606125 5352 ntBASIC3.78□□□□□ -1.8
APAF1O14727 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
APAF1O14727 MTND4P14-201ENST00000435799 1354 ntBASIC3.77□□□□□ -1.81
APAF1O14727 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.77□□□□□ -1.81
APAF1O14727 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
APAF1O14727 OR4G2P-201ENST00000328113 903 ntBASIC3.77□□□□□ -1.81
APAF1O14727 SNORA14A-201ENST00000364773 135 ntBASIC3.77□□□□□ -1.81
APAF1O14727 RNU6-996P-201ENST00000365438 107 ntBASIC3.77□□□□□ -1.81
APAF1O14727 MIR181A2-201ENST00000384863 110 ntBASIC3.77□□□□□ -1.81
APAF1O14727 RNU6-1158P-201ENST00000391167 107 ntBASIC3.77□□□□□ -1.81
APAF1O14727 CIR1P3-201ENST00000405137 479 ntBASIC3.77□□□□□ -1.81
APAF1O14727 AL590002.1-201ENST00000406554 418 ntBASIC3.77□□□□□ -1.81
APAF1O14727 RNA5SP111-201ENST00000411386 101 ntBASIC3.77□□□□□ -1.81
APAF1O14727 NDUFS5P4-201ENST00000412983 318 ntBASIC3.77□□□□□ -1.81
APAF1O14727 USP9YP6-201ENST00000413550 854 ntBASIC3.77□□□□□ -1.81
APAF1O14727 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.77□□□□□ -1.81
APAF1O14727 UBE2V1P10-201ENST00000414685 269 ntBASIC3.77□□□□□ -1.81
APAF1O14727 AL031779.1-201ENST00000415663 330 ntBASIC3.77□□□□□ -1.81
APAF1O14727 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.77□□□□□ -1.81
APAF1O14727 MTCO3P30-201ENST00000426425 670 ntBASIC3.77□□□□□ -1.81
APAF1O14727 AC104058.1-201ENST00000448028 297 ntBASIC3.77□□□□□ -1.81
APAF1O14727 RPS29P15-201ENST00000458329 171 ntBASIC3.77□□□□□ -1.81
APAF1O14727 AC083906.5-201ENST00000503722 328 ntBASIC3.77□□□□□ -1.81
APAF1O14727 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APAF1O14727 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.77□□□□□ -1.81
APAF1O14727 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.77□□□□□ -1.81
APAF1O14727 AL157871.3-201ENST00000557231 293 ntBASIC3.77□□□□□ -1.81
APAF1O14727 AC027807.1-201ENST00000559921 996 ntBASIC3.77□□□□□ -1.81
APAF1O14727 AL670379.4-201ENST00000605279 254 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms