Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 Y_RNA.665-201ENST00000516177 98 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AP000857.1-201ENST00000532151 543 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AL133271.1-201ENST00000538229 291 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 ELOCP31-201ENST00000540463 467 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AC018630.1-201ENST00000541376 925 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AL034351.1-201ENST00000605288 668 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AL121655.1-201ENST00000605811 308 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AL390240.1-201ENST00000612950 384 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AL353748.2-201ENST00000622148 471 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 MTCO1P9-201ENST00000505577 1534 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 AC004972.1-201ENST00000623934 2209 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.32□□□□□ -1.88
C4orf47A7E2U8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
C4orf47A7E2U8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 Y_RNA.315-201ENST00000365117 102 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 RNU6-38P-201ENST00000384085 107 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 MIR454-201ENST00000390180 115 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 RNU6-278P-201ENST00000390945 109 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 SNORD37.1-201ENST00000390968 65 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AL391417.1-201ENST00000404100 426 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 HSPE1P1-201ENST00000421494 318 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 MTATP6P16-201ENST00000434543 526 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 RNU7-59P-201ENST00000459101 61 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 RNU6-333P-201ENST00000459117 107 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AL049714.1-201ENST00000466686 347 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 RPL21P99-201ENST00000480369 423 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 RN7SKP219-201ENST00000516825 296 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 RN7SKP209-201ENST00000516888 304 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 RPL7P20-201ENST00000520308 745 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AC008489.1-201ENST00000524271 483 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AP005435.4-201ENST00000529514 284 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AC128657.1-201ENST00000549459 145 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AL163153.1-201ENST00000554223 283 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 FRG2DP-202ENST00000566967 323 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AC093732.2-201ENST00000607950 274 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 ATP5A1P2-202ENST00000616464 443 ntBASIC3.31□□□□□ -1.88
C4orf47A7E2U8 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.31□□□□□ -1.88
C4orf47A7E2U8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC073343.1-201ENST00000328239 651 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 FTLP6-201ENST00000355274 422 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 MIR369-201ENST00000362155 70 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 RNA5SP432-201ENST00000362480 116 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 Y_RNA.128-201ENST00000363391 112 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 RNU6-522P-201ENST00000364497 107 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 MIR558-201ENST00000384920 94 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 MIR559-201ENST00000385188 96 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 RNU4-26P-201ENST00000410270 107 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 RNU6-516P-201ENST00000411381 104 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC018630.2-202ENST00000422992 927 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 GTF2IP13-201ENST00000438487 386 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC107083.1-201ENST00000439643 279 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 RPS29P15-201ENST00000458329 171 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 Y_RNA.639-201ENST00000458981 102 ntBASIC3.3□□□□□ -1.88
C4orf47A7E2U8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.3□□□□□ -1.88
C4orf47A7E2U8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms