Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 Y_RNA.324-201ENST00000365165 102 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 RNY3-201ENST00000365484 102 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 XGY1-201ENST00000381172 446 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.490-201ENST00000384413 102 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 RNU6-1011P-201ENST00000384668 107 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 MIR1911-201ENST00000410783 80 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 RPL7P37-201ENST00000425095 738 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AL627311.1-201ENST00000431514 115 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AC236972.2-201ENST00000434979 310 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 RNA5SP341-201ENST00000516261 117 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 RNU6-703P-201ENST00000516946 107 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AC025755.1-201ENST00000521306 278 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AC022882.1-201ENST00000532142 501 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AMZ2P1-203ENST00000565833 850 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 MIR4769-201ENST00000584126 77 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 MIR4276-201ENST00000584832 70 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AL645944.1-201ENST00000603857 493 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 APOOP1-201ENST00000604695 592 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 AC019278.1-201ENST00000623516 479 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 RNU6-593P-201ENST00000364716 112 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 RNU6-1297P-201ENST00000384415 104 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 SNORD66.1-201ENST00000391230 76 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.623-201ENST00000411128 95 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 RPL37P10-201ENST00000412884 288 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 AC104333.2-201ENST00000422630 192 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 AC098614.2-201ENST00000426040 255 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 AC092573.2-201ENST00000434546 243 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 RPS23P3-201ENST00000470993 430 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 RNA5SP249-201ENST00000516127 99 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 RNU6-273P-201ENST00000516937 96 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 YPEL5P3-201ENST00000547227 352 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 RPL23AP97-201ENST00000568955 471 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 AL353621.2-201ENST00000605340 133 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 AL133255.1-201ENST00000606374 441 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 AC098657.3-201ENST00000620434 263 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 AL731532.2-201ENST00000623542 1953 ntBASIC4.34□□□□□ -1.71
CCDC85CA6NKD9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.34□□□□□ -1.72
CCDC85CA6NKD9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC85CA6NKD9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC85CA6NKD9 MFSD8-236ENST00000641509 4050 ntBASIC4.34□□□□□ -1.72
CCDC85CA6NKD9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 RNU6-166P-201ENST00000384371 107 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 FAT1P1-201ENST00000406588 507 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AL591034.1-201ENST00000407447 340 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 SNORA74C-2-201ENST00000411179 201 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 TMEM167AP1-201ENST00000423409 219 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 UBE2V1P4-201ENST00000425374 344 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AL645568.3-201ENST00000433683 316 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 ANP32BP2-201ENST00000454525 545 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AC139453.3-201ENST00000493276 369 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 RN7SL504P-201ENST00000494496 287 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 Y_RNA.676-201ENST00000516393 96 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 SNORA31.19-201ENST00000517079 126 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AP005597.4-201ENST00000526762 229 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC85CA6NKD9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC85CA6NKD9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms