Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.37□□□□□ -1.87
TBC1D3FA6NER0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AC118273.1-201ENST00000525324 3006 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 Y_RNA.157-201ENST00000363638 102 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 RNU6-522P-201ENST00000364497 107 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 Y_RNA.378-201ENST00000365652 113 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 SNORA75B-201ENST00000384053 137 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 MIR578-201ENST00000384828 96 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 MIR301A-201ENST00000385261 86 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 SNORD70.1-201ENST00000391007 85 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AL592114.1-201ENST00000403842 483 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 FAT1P1-201ENST00000406588 507 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 Y_RNA.615-201ENST00000410769 117 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 Z99755.1-201ENST00000414048 380 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AL121601.2-201ENST00000438019 707 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AL360271.2-201ENST00000447710 161 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 TRBV1-201ENST00000476502 284 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 RPS29P2-201ENST00000479278 136 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 RPL21P93-201ENST00000480465 489 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AC139453.3-201ENST00000493276 369 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 MTCO2P30-201ENST00000503662 364 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AC110794.1-201ENST00000505816 425 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AC006445.2-201ENST00000510061 472 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 SNORA20.3-201ENST00000516880 132 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 RNA5SP165-201ENST00000517142 115 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 BNIP3P6-201ENST00000549284 499 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AL157871.3-201ENST00000557231 293 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 MIR1273C-201ENST00000578669 77 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 HSPE1P7-201ENST00000604681 321 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 BNIP3P10-201ENST00000605360 577 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AP003122.6-201ENST00000623831 495 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AP003400.5-201ENST00000624827 617 ntBASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.36□□□□□ -1.87
TBC1D3FA6NER0 AL359693.1-201ENST00000614959 2407 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 Y_RNA.167-201ENST00000363735 109 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 RNU6-270P-201ENST00000364131 105 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 RNU6-393P-201ENST00000384475 107 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 RPS4XP3-201ENST00000398541 413 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC002075.2-201ENST00000425207 252 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 ZNF863P-201ENST00000426746 417 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 SNRPEP9-201ENST00000436794 238 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC115115.1-201ENST00000449927 248 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 SSXP4-201ENST00000451349 245 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 RPL12P25-201ENST00000455592 494 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 RPL21P13-201ENST00000488305 481 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC022493.1-201ENST00000492984 337 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC104136.1-201ENST00000512969 394 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 LRRC34P2-201ENST00000514850 553 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 Y_RNA.665-201ENST00000516177 98 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 CENPUP1-201ENST00000526649 1202 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC023050.3-201ENST00000541142 333 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AL121579.1-201ENST00000555129 305 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AMZ2P1-203ENST00000565833 850 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC018638.8-201ENST00000588755 281 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC012493.2-201ENST00000595083 291 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 FTX_3.1-201ENST00000610451 147 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC009033.1-201ENST00000624279 431 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC090617.10-201ENST00000624308 134 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 AC100810.6-201ENST00000638068 285 ntBASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
TBC1D3FA6NER0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 Y_RNA.160-201ENST00000363677 92 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 SNORA1.3-201ENST00000384676 136 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 MIR128-1-201ENST00000384921 82 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 Y_RNA.604-201ENST00000410574 102 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 RNU6-1148P-201ENST00000410992 104 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 BX682237.1-201ENST00000415016 335 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 RPL21P90-201ENST00000415692 466 ntBASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.34□□□□□ -1.87
TBC1D3FA6NER0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms