Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 BX284632.1-201ENST00000478218 541 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AL132838.2-201ENST00000492041 314 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AC026784.1-201ENST00000507986 352 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AC105129.1-201ENST00000560250 297 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AC091903.1-201ENST00000624322 454 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 U6.99-201ENST00000637524 83 ntBASIC4.03□□□□□ -1.76
SHISA3A0PJX4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SHISA3A0PJX4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 A2MP1-204ENST00000566278 4130 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 Y_RNA.65-201ENST00000362846 100 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 SNORD115-32-201ENST00000364079 82 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AL079342.1-201ENST00000401460 267 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 SNORA11B-201ENST00000408175 129 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 RNA5SP31-201ENST00000411144 127 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 RPS6P12-201ENST00000432491 726 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 HMGN2P21-201ENST00000447764 270 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 snoU109.2-201ENST00000459316 135 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 RPL31P13-201ENST00000484151 370 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AC072052.1-201ENST00000496556 306 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AC015795.1-201ENST00000513669 327 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AP004607.1-201ENST00000524456 203 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AC133555.2-201ENST00000550213 292 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 HMGN2P6-201ENST00000551091 273 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AC011447.4-201ENST00000587562 111 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AC024153.1-201ENST00000603103 365 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 MIR6719-201ENST00000622428 87 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 CR381572.2-201ENST00000624852 397 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 HSPA8P1-201ENST00000425843 1833 ntBASIC4.02□□□□□ -1.77
SHISA3A0PJX4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.02□□□□□ -1.77
SHISA3A0PJX4 NEAT1-202ENST00000501122 22743 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 SCN1A-220ENST00000641603 12506 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RNU6-1301P-201ENST00000362724 104 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RNU1-63P-201ENST00000383902 164 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RNU6-968P-201ENST00000384076 107 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RNU6-17P-201ENST00000384245 107 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RNU1-44P-201ENST00000384453 163 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RNU6-18P-201ENST00000384527 107 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 Y_RNA.541-201ENST00000384640 113 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RN7SKP213-201ENST00000410746 298 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 AL139156.1-201ENST00000412785 841 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 EIF1AXP1-201ENST00000419267 435 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 AC092047.1-201ENST00000424997 240 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 AC011753.3-201ENST00000443436 406 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 U8.22-201ENST00000459141 133 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RN7SL515P-201ENST00000463999 297 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RNA5SP154-201ENST00000516193 111 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RNU6-703P-201ENST00000516946 107 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 AP006245.1-201ENST00000522549 120 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 RMST_6.1-201ENST00000611980 203 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 U2.14-201ENST00000615943 113 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 MARK2P15-201ENST00000432204 2186 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 AC009541.1-201ENST00000438279 2662 ntBASIC4.01□□□□□ -1.77
SHISA3A0PJX4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHISA3A0PJX4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
SHISA3A0PJX4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHISA3A0PJX4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4□□□□□ -1.77
SHISA3A0PJX4 Y_RNA.277-201ENST00000364754 102 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4□□□□□ -1.77
SHISA3A0PJX4 AC009296.1-201ENST00000443146 155 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 CEACAMP7-201ENST00000444105 496 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms