Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 AL161756.2-201ENST00000604597 246 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 MTND4LP5-201ENST00000605152 292 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 AL121917.1-203ENST00000605534 577 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 RNA5SP124-201ENST00000362739 110 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 Y_RNA.146-201ENST00000363549 102 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 U1.1-201ENST00000384101 164 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 SNORA9-201ENST00000384215 133 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-790P-201ENST00000384479 105 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 MIR483-201ENST00000385070 76 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 AC097713.2-201ENST00000430199 356 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 NDUFB1P2-201ENST00000449477 176 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 AL591473.1-201ENST00000464297 313 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 HMGN1P11-201ENST00000508668 303 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-1016P-201ENST00000516689 94 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 AC008121.1-201ENST00000603244 268 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 AL161423.1-201ENST00000613700 262 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 MIR6076-201ENST00000617521 113 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC163A0A0D9SF12 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-1188P-201ENST00000363795 107 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 SNORA75.4-201ENST00000391278 119 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 RPL5P18-201ENST00000406671 891 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 MIR1911-201ENST00000410783 80 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 RPS3AP12-201ENST00000443616 753 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 PCMTD1P1-201ENST00000455560 355 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AL049830.2-201ENST00000480072 201 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AC005741.1-201ENST00000511094 432 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AC093303.1-201ENST00000514549 295 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AC007179.3-201ENST00000604976 235 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 MIR8069-1-201ENST00000616627 86 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 MIR8069-2-201ENST00000621412 86 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AC244517.12-201ENST00000623581 663 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AC073308.1-201ENST00000623696 305 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 AC118273.1-201ENST00000525324 3006 ntBASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC163A0A0D9SF12 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 Y_RNA.2-201ENST00000362330 96 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-1227P-201ENST00000383981 107 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 MIR517A-201ENST00000385001 87 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 SNORD66.1-201ENST00000391230 76 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 RN7SKP156-201ENST00000410308 342 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-1050P-201ENST00000410388 107 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AC093578.1-201ENST00000415219 368 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AL096701.2-201ENST00000416920 238 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AF228730.4-201ENST00000421457 183 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 Z82205.1-201ENST00000428456 297 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AC236972.1-201ENST00000433225 199 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AC006011.1-201ENST00000442758 349 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 AL118496.2-201ENST00000448300 230 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 MTCO3P10-201ENST00000455912 772 ntBASIC4.09□□□□□ -1.75
CCDC163A0A0D9SF12 HMGN2P13-201ENST00000476476 274 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms