Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 BNIP3P19-201ENST00000605397 577 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 AC008945.2-201ENST00000606056 604 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 AC004067.1-201ENST00000608733 700 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 DUXAP10-204ENST00000612052 616 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR3199-2-201ENST00000636243 86 ntBASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
TRAV1-2A0A0B4J238 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU6-878P-201ENST00000384578 110 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR518D-201ENST00000385014 87 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AC004965.1-201ENST00000413033 213 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AC005345.1-201ENST00000431868 217 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AC010095.1-201ENST00000443543 144 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AL353691.1-201ENST00000451332 387 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 RNU6-902P-201ENST00000517212 91 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AP003034.1-201ENST00000534621 422 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AC135279.1-201ENST00000543493 504 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AC006199.1-201ENST00000548728 219 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 SNRPGP17-201ENST00000603780 214 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AC098826.3-201ENST00000603823 466 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AC116312.1-201ENST00000606841 314 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 U1.36-201ENST00000620684 176 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 AC104820.1-201ENST00000624183 307 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV1-2A0A0B4J238 MTND5P9-201ENST00000503854 1755 ntBASIC0.65□□□□□ -2.3
TRAV1-2A0A0B4J238 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-778P-201ENST00000363269 103 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU6-819P-201ENST00000364116 107 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AL591034.2-201ENST00000402839 359 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU2-36P-201ENST00000410361 191 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AC007919.1-201ENST00000429380 217 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AL365400.1-201ENST00000431854 640 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AC245517.4-201ENST00000448601 281 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AP001324.2-201ENST00000461163 319 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AC084024.2-201ENST00000503480 791 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 RNA5SP291-201ENST00000517222 105 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AC124293.1-201ENST00000530034 493 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 CBX3P8-201ENST00000532412 525 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 NACAP3-201ENST00000552100 481 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 AC092953.2-201ENST00000608000 699 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV1-2A0A0B4J238 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 RNU11-5P-201ENST00000391216 129 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 RNA5SP501-201ENST00000410990 112 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 FAM204CP-201ENST00000424489 642 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AL591806.2-201ENST00000433122 173 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 MTCO1P53-201ENST00000441633 699 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 RPS4XP11-201ENST00000446897 772 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 ARPC3P5-201ENST00000448802 534 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 KATNBL1P6-201ENST00000453433 915 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 RPS15AP17-201ENST00000470598 390 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 RPS3AP22-201ENST00000488297 769 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AC018437.1-201ENST00000492214 406 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 RPL23AP94-201ENST00000512518 302 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AC093677.1-201ENST00000514414 678 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 IGJP1-201ENST00000522682 475 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AC005832.3-201ENST00000537929 631 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AC021739.1-201ENST00000559631 174 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 SULT1C2P1-202ENST00000562418 459 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AC080078.3-201ENST00000605407 463 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AC099842.1-201ENST00000619919 596 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AL512506.2-201ENST00000624472 458 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 Z75746.1-201ENST00000440243 2080 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 MTCO1P18-201ENST00000455518 1419 ntBASIC0.64□□□□□ -2.31
TRAV1-2A0A0B4J238 AL391987.6-201ENST00000305671 199 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 MIR7-1-201ENST00000384871 110 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC097463.2-201ENST00000421074 142 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC108667.1-201ENST00000428618 249 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 AC245047.4-201ENST00000433189 144 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 RPL7P34-201ENST00000433316 712 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 USP9YP35-201ENST00000435696 412 ntBASIC0.63□□□□□ -2.31
TRAV1-2A0A0B4J238 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms