Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 DNAJC8P1-201ENST00000554535 372 ntBASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 GNRHR2P1-201ENST00000555315 631 ntBASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 AC044792.1-201ENST00000593294 196 ntBASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 AP000654.2-201ENST00000605633 586 ntBASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 MIR8058-201ENST00000615737 89 ntBASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 FP236240.3-201ENST00000623061 327 ntBASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 AC015813.6-201ENST00000624409 5808 ntBASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
GTF3C3Q9Y5Q9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 KPNA2P1-201ENST00000458289 1591 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 Y_RNA.187-201ENST00000363918 113 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU6-336P-201ENST00000364891 107 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU6-306P-201ENST00000384617 107 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 MIR767-201ENST00000390228 109 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 Y_RNA.594-201ENST00000410373 140 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AC018644.1-201ENST00000429934 551 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AC236972.1-201ENST00000433225 199 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 NOTCH2P1-201ENST00000443481 624 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 NUTF2P7-201ENST00000453086 375 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AC026784.1-201ENST00000507986 352 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AC063950.1-201ENST00000552036 308 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AP002799.1-201ENST00000623552 423 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 AC010889.1-201ENST00000566193 2666 ntBASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GTF3C3Q9Y5Q9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 Y_RNA.146-201ENST00000363549 102 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 MIR621-201ENST00000384919 96 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 AL500522.2-201ENST00000448562 343 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 RPL30P15-201ENST00000457129 321 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU7-170P-201ENST00000459303 61 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 MED28P2-201ENST00000475771 317 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU6-612P-201ENST00000516909 102 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 IGKV2-23-201ENST00000518729 323 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 MIR4273-201ENST00000582824 84 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 MIR8076-201ENST00000611401 83 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 AL691477.1-201ENST00000624398 162 ntBASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
GTF3C3Q9Y5Q9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 RNU6-799P-201ENST00000363567 107 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 RN7SKP227-201ENST00000364445 330 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 SNORD116-29-201ENST00000384516 83 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 RNA5SP36-201ENST00000410197 133 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 RPL37P18-201ENST00000411602 243 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 FAR2P2-201ENST00000413041 594 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AC002075.2-201ENST00000425207 252 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 USP9YP30-201ENST00000430729 455 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 RN7SL717P-201ENST00000478343 297 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 RPL7P47-201ENST00000497299 556 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AC140172.1-201ENST00000502928 141 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AC097473.1-201ENST00000508142 408 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 Y_RNA.701-201ENST00000516812 110 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 SNORA31.18-201ENST00000517043 134 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 OR7E18P-201ENST00000592589 702 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AC009229.3-201ENST00000608056 282 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AL669831.3-213ENST00000636676 183 ntBASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GTF3C3Q9Y5Q9 MTND5P10-201ENST00000603719 1809 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 IPO8P1-201ENST00000455509 3109 ntBASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.53□□□□□ -1.52
GTF3C3Q9Y5Q9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms