Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC106785.1-201ENST00000565935 262 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AC073539.2-201ENST00000597113 165 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 ATP1B3P1-201ENST00000605365 821 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AL391261.4-201ENST00000616012 481 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 SNORD39.4-201ENST00000620099 78 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AL355596.1-201ENST00000565399 3996 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 AL049641.1-201ENST00000441055 1948 ntBASIC3.75□□□□□ -1.81
PCDHA3Q9Y5H8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 Y_RNA.212-201ENST00000364177 102 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 RPS4XP7-201ENST00000406274 780 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 AL353621.1-201ENST00000418219 243 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 CECR9-201ENST00000453421 199 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 AL136097.1-201ENST00000456945 913 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 AC021205.2-201ENST00000480069 347 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 AC022493.1-201ENST00000492984 337 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 MTCO1P29-201ENST00000496868 288 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 RN7SL703P-201ENST00000578485 302 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 MIR4719-201ENST00000585233 84 ntBASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHA3Q9Y5H8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 Y_RNA.184-201ENST00000363884 108 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 RNU6-607P-201ENST00000411283 108 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AC017079.2-201ENST00000416102 485 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 RN7SL594P-201ENST00000470590 287 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 RNU6-256P-201ENST00000516747 97 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AC007991.1-201ENST00000522680 631 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 CASP1P1-201ENST00000526345 212 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 LRRC37A5P-203ENST00000580181 585 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 MIR3942-201ENST00000585264 109 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AC104237.2-201ENST00000612456 443 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 RMST_7.1-201ENST00000621935 268 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 AC118273.1-201ENST00000525324 3006 ntBASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHA3Q9Y5H8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AC022336.2-201ENST00000568966 2538 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 RNU6-694P-201ENST00000364071 147 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 RN7SKP156-201ENST00000410308 342 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 RNU6-55P-201ENST00000411092 107 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 RNU6-954P-201ENST00000411355 107 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AC010401.1-201ENST00000463867 348 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 RPL7P43-201ENST00000478876 753 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AL135752.1-201ENST00000479477 471 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AL049830.2-201ENST00000480072 201 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 HMGB1P30-201ENST00000492455 606 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 MTND3P25-201ENST00000509243 135 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 SNORA25.17-201ENST00000517184 124 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 ZNF192P1-203ENST00000565888 810 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 MIR3672-201ENST00000584290 82 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 MIR5692C1-201ENST00000585309 91 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AL121757.2-201ENST00000611223 313 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AL031601.2-202ENST00000622650 282 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AL133216.2-202ENST00000634512 349 ntBASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHA3Q9Y5H8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 244.4 ms