Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 CYCSP33-201ENST00000414485 327 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 RPL23AP82-202ENST00000427528 469 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AL358472.1-201ENST00000431295 329 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AL359672.1-201ENST00000442302 409 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 NOTCH2P1-201ENST00000443481 624 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 MRPL50P4-201ENST00000446432 475 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AC139453.3-201ENST00000493276 369 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AC007151.1-201ENST00000572774 483 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 RPS3AP23-202ENST00000574601 686 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AC025627.2-201ENST00000576220 160 ntBASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PCDHGA6Q9Y5G7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 MTND4P29-201ENST00000503122 1372 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 RPS4XP5-202ENST00000449995 1334 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 AC073544.1-201ENST00000600110 1595 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 RNU1-73P-201ENST00000383971 164 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 RNU6-166P-201ENST00000384371 107 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 RNU6-1106P-201ENST00000390845 107 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 AL360182.1-201ENST00000397433 468 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 AC074085.1-201ENST00000413598 418 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 MTND4P28-201ENST00000426217 387 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 SSXP4-201ENST00000451349 245 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 AL583843.1-201ENST00000456070 346 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 AC006026.2-201ENST00000457376 180 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 RNU1-103P-201ENST00000516502 125 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 MIR2114-201ENST00000516645 80 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 RNU6-566P-201ENST00000516790 107 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 SCOCP1-201ENST00000554676 349 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 MIR3672-201ENST00000584290 82 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 SNORA51-201ENST00000606420 132 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 AC005858.4-201ENST00000623191 700 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 AL359697.1-201ENST00000624879 587 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 U2.21-201ENST00000637295 81 ntBASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGA6Q9Y5G7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 SNORA71.3-201ENST00000362582 128 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 RNU6-778P-201ENST00000363269 103 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 SNORD14B-201ENST00000364533 90 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 SNORD116-11-201ENST00000383882 92 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 Y_RNA.384-201ENST00000383909 102 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 Y_RNA.529-201ENST00000384586 119 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 AL356057.2-201ENST00000403318 432 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 RPL5P18-201ENST00000406671 891 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 SNORA57.3-201ENST00000411095 141 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 UBE2V1P4-201ENST00000425374 344 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 HMGN2P20-201ENST00000437531 273 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 AC107399.1-201ENST00000451226 265 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 BTF3L4P4-201ENST00000506381 449 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 LINC00933-203ENST00000559812 219 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 MIR3942-201ENST00000585264 109 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 OR1M4P-201ENST00000589199 287 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 NUTF2P8-201ENST00000604593 363 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 HSPE1P7-201ENST00000604681 321 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 AC012468.1-201ENST00000604888 430 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 AL132765.2-201ENST00000610812 351 ntBASIC3.77□□□□□ -1.81
PCDHGA6Q9Y5G7 AL138726.1-201ENST00000614873 333 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms